RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 SLCO1B7G3V0H7 640 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 EMC8O43402 210 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 KCNH1O95259 989 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 HPNP05981 417 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 G6PDP11413 515 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 GABRA1P14867 456 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 GCKP35557 465 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
SHMT2-204ENST00000553324 CLDN8P56748 225 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 WDR4P57081 412 aaKnown RBP14.03□□□□□ -0.16
SHMT2-204ENST00000553324 C21orf58P58505 322 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 GAB1Q13480 694 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 PTGR1Q14914 329 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF385BQ569K4 471 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 BICRALQ6AI39 1079 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 ACAD11Q709F0 780 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 CDRT4Q8N9R6 151 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 NUP43Q8NFH3 380 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 MGARPQ8TDB4 240 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 OR5P2Q8WZ92 322 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 DMRTA2Q96SC8 542 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 C1orf50Q9BV19 199 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 BHLHE41Q9C0J9 482 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-204ENST00000553324 UBQLN3Q9H347 655 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 MANSC1Q9H8J5 431 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 HHATLQ9HCP6 504 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 SDHAF3Q9NRP4 125 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 GIMAP2Q9UG22 337 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 C15orf41Q9Y2V0 281 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 CROCCQ5TZA2 2017 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 SETXQ7Z333 2677 aaKnown RBP14.02□□□□□ -0.16
SHMT2-204ENST00000553324 ADAM10O14672 748 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 SNPHO15079 494 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 ZNHIT1O43257 154 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 WDR1O75083 606 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 CELA3AP09093 270 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 LAMP1P11279 417 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 LBPP18428 481 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 GABRA3P34903 492 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 PTGER4P35408 488 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 CDK9P50750 372 aaKnown RBP14.02□□□□□ -0.17
SHMT2-204ENST00000553324 PRKAG1P54619 331 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 ADORA2A-AS1P86434 159 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 TOMM20Q15388 145 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 SF3B4Q15427 424 aaKnown RBP eCLIP14.02□□□□□ -0.177e-19■■■■□ 22
SHMT2-204ENST00000553324 FNDC7Q5VTL7 733 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 HDXQ7Z353 690 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 RIMKLAQ8IXN7 391 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 GOLGA6L1Q8N7Z2 621 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 OR4N2Q8NGD1 307 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 HOXB13Q92826 284 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-204ENST00000553324 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 CHST11Q9NPF2 352 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 LIPGQ9Y5X9 500 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 MYO7BQ6PIF6 2116 aa14.02□□□□□ -0.17
SHMT2-204ENST00000553324 SPTBN1Q01082 2364 aaKnown RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 DIDO1Q9BTC0 2240 aaKnown RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 FAM47E-STBD1D6RA91 191 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 GNB5O14775 395 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 HDAC3O15379 428 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 SNNO75324 88 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 NME6O75414 186 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 IL33O95760 270 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 ACVR2AP27037 513 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PTPN6P29350 595 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PTGDSP41222 190 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PRIM2P49643 509 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 EMC4Q5J8M3 183 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 ZNF585AQ6P3V2 769 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 BHLHB9Q6PI77 547 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 C3P1Q6ZMU1 363 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 SZRD1Q7Z422 152 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 CAMKMTQ7Z624 323 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PM20D2Q8IYS1 436 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 VPS37AQ8NEZ2 397 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 OR5M9Q8NGP3 310 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PSMA8Q8TAA3 256 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 GPR151Q8TDV0 419 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 RND1Q92730 232 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 MOAP1Q96BY2 351 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 EFHD2Q96C19 240 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PPP1R36Q96LQ0 422 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 MS4A4EQ96PG1 132 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 DUSP26Q9BV47 211 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 NUF2Q9BZD4 464 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PNPLA3Q9NST1 481 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 PNPOQ9NVS9 261 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 ABCG2Q9UNQ0 655 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 MRPS18CQ9Y3D5 142 aaKnown RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 SPTAN1Q13813 2472 aaKnown RBP14.01□□□□□ -0.17
SHMT2-204ENST00000553324 ICE1Q9Y2F5 2266 aa14.01□□□□□ -0.17
SHMT2-204ENST00000553324 C15orf38-AP3S2A0A0A6YYH1 394 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 AHRRA9YTQ3 701 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 KLF11O14901 512 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms