RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PPP2R1BP30154 601 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SLC7A1P30825 629 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 TTKP33981 857 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 HNF4AP41235 474 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 CASP3P42574 277 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 NPY2RP49146 381 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 STARP49675 285 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 HNRNPH2P55795 449 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 CTBP2P56545 445 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 NRG3P56975 720 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 RAB38P57729 211 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 STXBP1P61764 594 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 IRX1P78414 480 aaPredicted RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 GPS1Q13098 491 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SP140Q13342 867 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 CPSF6Q16630 551 aaKnown RBP eCLIP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 PARP6Q2NL67 630 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 KLHL38Q2WGJ6 581 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 TTLL9Q3SXZ7 439 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 VAX1Q5SQQ9 334 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 DCST1Q5T197 706 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SLC30A6Q6NXT4 461 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SHQ1Q6PI26 577 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 STAC2Q6ZMT1 411 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 H2AFVQ71UI9 128 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 IFNEQ86WN2 208 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 GLB1L2Q8IW92 636 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 PALM2Q8IXS6 379 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC56Q8IYG6 542 aaPredicted RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 MPP5Q8N3R9 675 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 PCYOX1LQ8NBM8 494 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SPC24Q8NBT2 197 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ABHD11Q8NFV4 315 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 OR4K1Q8NGD4 311 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SPPL2AQ8TCT8 520 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 CALML6Q8TD86 181 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF721Q8TF20 911 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 PEX13Q92968 403 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 CTHRC1Q96CG8 243 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SMIM10Q96HG1 83 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 DHRS9Q9BPW9 319 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SUCNR1Q9BXA5 334 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 TRIM2Q9C040 744 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SLITRK2Q9H156 845 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 HSD3B7Q9H2F3 369 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ACTR8Q9H981 624 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SERHLQ9NQF3 203 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 DDX28Q9NUL7 540 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 STOML1Q9UBI4 398 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 MGAT4BQ9UQ53 548 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 EXO1Q9UQ84 846 aaKnown RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF175Q9Y473 711 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 MAD1L1Q9Y6D9 718 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 KIAA1549Q9HCM3 1950 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SCN3AQ9NY46 2000 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 NINQ8N4C6 2090 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 MALRD1Q5VYJ5 2156 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC53A6NM62 1247 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 LGALS16A8MUM7 142 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 E5RI56 91 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 H3BUI4 141 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 H7C417 338 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SCAMP2O15127 329 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CD3EAPO15446 510 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 HCRTR2O43614 444 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SHOX2O60902 331 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 PLGP00747 810 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 KRT1P04264 644 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 TPM1P09493 284 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 FCGR2AP12318 317 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SKILP12757 684 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 NPPBP16860 134 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF708P17019 499 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 PSMB1P20618 241 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 HIST1H2ADP20671 130 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SAT1P21673 171 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ZFP36P26651 326 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 PSMB4P28070 264 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RBL1P28749 1068 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 FMO4P31512 558 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CCKARP32238 428 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RPL22P35268 128 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SKIV2L2P42285 1042 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SLC1A1P43005 524 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 LHX2P50458 406 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 FABP6P51161 128 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CHN2P52757 468 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 DVL1P1P54792 670 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SUMO3P55854 103 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 MVKQ03426 396 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SNTA1Q13424 505 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RUNX2Q13950 521 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CSHL1Q14406 222 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RAB39AQ14964 217 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ALKBH5Q6P6C2 394 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms