RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 FOXD3Q9UJU5 478 aaPredicted RBP12.2□□□□□ -0.46
GCN1-206ENST00000549815 MRPS18CQ9Y3D5 142 aaKnown RBP12.2□□□□□ -0.46
GCN1-206ENST00000549815 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
GCN1-206ENST00000549815 MED12LQ86YW9 2145 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 UPK1AO00322 258 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 ZIC3O60481 467 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 SLITRK5O94991 958 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 IL18BPO95998 194 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 JUNP05412 331 aaKnown RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 CYP4B1P13584 511 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 MC3RP41968 323 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 LHX2P50458 406 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.46
GCN1-206ENST00000549815 AGFG1P52594 562 aaKnown RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 CLDN18P56856 261 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 SLC18A2Q05940 514 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 FOXF2Q12947 444 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 FLYWCH1Q4VC44 716 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 NOXRED1Q6NXP6 359 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 SLC44A2Q8IWA5 706 aaPredicted RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 OR14L1PQ8NHC6 308 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 RDH11Q8TC12 318 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 EFHD2Q96C19 240 aaPredicted RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 BBS4Q96RK4 519 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 GPATCH1Q9BRR8 931 aaKnown RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 RASSF1Q9NS23 344 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
GCN1-206ENST00000549815 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 WBP11Q9Y2W2 641 aaKnown RBP12.19□□□□□ -0.46
GCN1-206ENST00000549815 MPDZO75970 2070 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 FADS1O60427 444 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 COQ9O75208 318 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 RCBTB2O95199 551 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 IFI6P09912 130 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 UROSP10746 265 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 CPA3P15088 417 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 ZNF708P17019 499 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 GRK2P25098 689 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 TACR1P25103 407 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 IL12BP29460 328 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 OPRM1P35372 400 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 CCT5P48643 541 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 STARP49675 285 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 IST1P53990 364 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 B3GALT5-AS1P59052 145 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 RCAN2Q14206 197 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 DAZAP2Q15038 168 aaPredicted RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 IMPG1Q17R60 797 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 OR5M10Q6IEU7 315 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 ENPP6Q6UWR7 440 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 TMEM107Q6UX40 140 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 RNF165Q6ZSG1 346 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 IKBIPQ70UQ0 350 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 IFNEQ86WN2 208 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 EPS8L3Q8TE67 593 aaKnown RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 FAM222BQ8WU58 562 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 NINJ1Q92982 152 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 ELP4Q96EB1 424 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 METTL2AQ96IZ6 378 aaKnown RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 EGLN2Q96KS0 407 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 FCRL1Q96LA6 429 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 AMDHD1Q96NU7 426 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 LMF2Q9BU23 707 aaKnown RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 POLDIP3Q9BY77 421 aaKnown RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 RTN4RQ9BZR6 473 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 LIME1Q9H400 295 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 PPCSQ9HAB8 311 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 MIEF1Q9NQG6 463 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
GCN1-206ENST00000549815 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 CLCF1Q9UBD9 225 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 ITPR3Q14573 2671 aa12.18□□□□□ -0.46
GCN1-206ENST00000549815 A6NNC1 897 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 CLCA1A8K7I4 914 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 H0Y3Z8 333 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 HCRTR2O43614 444 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 TMIGD3P0DMS9 266 aaPredicted RBP12.17□□□□□ -0.46
GCN1-206ENST00000549815 CHMP24386 653 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 EVI2BP34910 448 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 GCKP35557 465 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 KRT20P35900 424 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 ART1P52961 327 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 SORDQ00796 357 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 SRYQ05066 204 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 ZNF155Q12901 538 aaPredicted RBP12.17□□□□□ -0.46
GCN1-206ENST00000549815 GAB1Q13480 694 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 PCLAFQ15004 111 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 CYP27C1Q4G0S4 372 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 CFAP157Q5JU67 520 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 LIPMQ5VYY2 423 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 CLEC6AQ6EIG7 209 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 Q6ZSR9 355 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms