RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 MRPS35P82673 323 aaKnown RBP11.64□□□□□ -0.55
PTCH1-218ENST00000548945 CSTF3Q12996 717 aaKnown RBP11.64□□□□□ -0.55
PTCH1-218ENST00000548945 LTB4RQ15722 352 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 CT45A2Q5DJT8 189 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 C1orf52Q8N6N3 182 aaKnown RBP11.64□□□□□ -0.55
PTCH1-218ENST00000548945 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 PIGTQ969N2 578 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 ADOQ96SZ5 270 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 STMN4Q9H169 189 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-218ENST00000548945 ANKZF1Q9H8Y5 726 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 DKKL1Q9UK85 242 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 FBXL2Q9UKC9 423 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-218ENST00000548945 FBN3Q75N90 2809 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 ZIC3O60481 467 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 TGM6O95932 706 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 KRT6AP02538 564 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 KRT6BP04259 564 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 HEXAP06865 529 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 PEPDP12955 493 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 GRK2P25098 689 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 DPP4P27487 766 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 IL12BP29460 328 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 MC3RP41968 323 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 GSTM5P46439 218 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 KRT6CP48668 564 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 GAS1P54826 345 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 DSCR4P56555 118 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-218ENST00000548945 EEFSECP57772 596 aaKnown RBP11.63□□□□□ -0.55
PTCH1-218ENST00000548945 RASA2Q15283 850 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 POU4F3Q15319 338 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 CLEC9AQ6UXN8 241 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 LARP4Q71RC2 724 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCH1-218ENST00000548945 CHMP1BQ7LBR1 199 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 PFDN4Q9NQP4 134 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 TAS2R9Q9NYW1 312 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 HEY2Q9UBP5 337 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF225Q9UK10 706 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 NFU1Q9UMS0 254 aa11.63□□□□□ -0.55
PTCH1-218ENST00000548945 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 A8MT66 165 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 MANBAO00462 879 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 PPP6CO00743 305 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SMPD2O60906 423 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SLITRK5O94991 958 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 ESRRBO95718 433 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 MPIP34949 423 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 CPOXP36551 454 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 HSD17B3P37058 310 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 CD79BP40259 229 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 CDH13P55290 713 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 CORO7P57737 925 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 B3GALT5-AS1P59052 145 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 OCRLQ01968 901 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 CLCQ05315 142 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 FGFBP1Q14512 234 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 GANABQ14697 944 aaKnown RBP11.62□□□□□ -0.55
PTCH1-218ENST00000548945 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SPIN4Q56A73 249 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 FAM180BQ6P0A1 224 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 WDR93Q6P2C0 686 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 GALNT18Q6P9A2 607 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 NPSR1Q6W5P4 371 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 RPS27LQ71UM5 84 aaKnown RBP11.62□□□□□ -0.55
PTCH1-218ENST00000548945 P4HA3Q7Z4N8 544 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 P3H2Q8IVL5 708 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 TMEM151AQ8N4L1 468 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 ARSGQ96EG1 525 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 WFIKKN1Q96NZ8 548 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 PAFAH2Q99487 392 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SMR3AQ99954 134 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 FOLH1BQ9HBA9 442 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 SLC35C2Q9NQQ7 365 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 GIMAP4Q9NUV9 329 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
PTCH1-218ENST00000548945 MXRA5Q9NR99 2828 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 GNG14A0A1W2PPG7 69 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 B4DXG7 233 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 EMC8O43402 210 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 PCDH7O60245 1069 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 ULK1O75385 1050 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 OR4F21O95013 312 aa11.61□□□□□ -0.55
PTCH1-218ENST00000548945 IL3P08700 152 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms