RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 PCSK2P16519 638 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 MYL9P24844 172 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 ETV6P41212 452 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 GPR68Q15743 365 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 KLHL12Q53G59 568 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 TOR1AIP1Q5JTV8 583 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 ZC3H14Q6PJT7 736 aaKnown RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 SYT9Q86SS6 491 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 TRIM69Q86WT6 500 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 ENKURQ8TC29 256 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 CCDC32Q9BV29 185 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 EPHX3Q9H6B9 360 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 PRSS16Q9NQE7 514 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 A0A1W2PRQ8 180 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 B4DXG7 233 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 MAN2B1O00754 1011 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 LGI1O95970 557 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 ADH1CP00326 375 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 PIPP12273 146 aaPredicted RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 NTSP30990 170 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 SMSP52788 366 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 SIM1P81133 766 aaPredicted RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 ELOAQ14241 798 aaKnown RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 FGL2Q14314 439 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 AGERQ15109 404 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 C16orf62Q7Z3J2 963 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 Q8N402 240 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 FAM26EQ8N5C1 309 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 SPPL3Q8TCT6 385 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 EFHD2Q96C19 240 aaPredicted RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 SENP5Q96HI0 755 aaPredicted RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 OR7D2Q96RA2 312 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 C3orf14Q9HBI5 128 aa14.11□□□□□ -0.15
USP28-214ENST00000545540 NFKBIL1Q9UBC1 381 aaPredicted RBP14.11□□□□□ -0.15
USP28-214ENST00000545540 CCNYL3P0C7X3 344 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 TBXA2RP21731 343 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 GAS1P54826 345 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 GLYR1Q49A26 553 aaPredicted RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 DDI2Q5TDH0 399 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 FAM111BQ6SJ93 734 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 CPOQ8IVL8 374 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 SPRYD4Q8WW59 207 aaPredicted RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 SAMD8Q96LT4 415 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 CAMK1GQ96NX5 476 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 FUZQ9BT04 418 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 POLDIP3Q9BY77 421 aaKnown RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 MRPS30Q9NP92 439 aaKnown RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 FBXO34Q9NWN3 711 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 DIMT1Q9UNQ2 313 aaKnown RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 GPR34Q9UPC5 381 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 EDDM13A0A1B0GTR0 161 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 C17orf113A0A1B0GUU1 675 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 GNB5O14775 395 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 SLC30A4O14863 429 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 AKR7A2O43488 359 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 EML2O95834 649 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 THY1P04216 161 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 GYPBP06028 91 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 TGM3Q08188 693 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 MEDAGQ5VYS4 303 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 SYCE2Q6PIF2 218 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 LYPD8Q6UX82 237 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 ADGRD2Q7Z7M1 963 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 NUP43Q8NFH3 380 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 CCDC86Q9H6F5 360 aaKnown RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 TRIM45Q9H8W5 580 aaPredicted RBP14.1□□□□□ -0.15
USP28-214ENST00000545540 ATP13A2Q9NQ11 1180 aa14.1□□□□□ -0.15
USP28-214ENST00000545540 A0A0A6YYD5 115 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 A8MVJ9 347 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 FAM25AB3EWG3 89 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 FAM25CB3EWG5 89 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 FAM25GB3EWG6 89 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 SLC2A2P11168 524 aaPredicted RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 AK4P27144 223 aaPredicted RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 DRD3P35462 400 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 RGS8P57771 180 aaPredicted RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 CDK5Q00535 292 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 REEP5Q00765 189 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 PRDX1Q06830 199 aaKnown RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 ENTPD8Q5MY95 495 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 PLBD1Q6P4A8 553 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 HDDC3Q8N4P3 179 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 FRMD1Q8N878 549 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 OR52E1Q8NGJ3 308 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 ZNF514Q96K75 400 aaPredicted RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 HCAR1Q9BXC0 346 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 SLC38A1Q9H2H9 487 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 SLC6A20Q9NP91 592 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 ZSCAN32Q9NX65 697 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 NDUFB5O43674 189 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 VEGFDO43915 354 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 TSC22D2O75157 780 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 TIMP1P01033 207 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 EIF2S1P05198 315 aaKnown RBP14.09□□□□□ -0.15
USP28-214ENST00000545540 CLUP10909 449 aa14.09□□□□□ -0.15
USP28-214ENST00000545540 CXCR2P25025 360 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms