RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TBL1XR1Q9BZK7 514 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 OR6C2Q9NZP2 312 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 MAST2Q6P0Q8 1798 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 GXYLT2A0PJZ3 443 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 CBLP22681 906 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 FLYWCH1Q4VC44 716 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 HES5Q5TA89 166 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 RNF111Q6ZNA4 994 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 METTL21AQ8WXB1 218 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 KCNN1Q92952 543 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 MED30Q96HR3 178 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 TMEM41AQ96HV5 264 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 FBXO8Q9NRD0 319 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 SLCO3A1Q9UIG8 710 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 C1orf226A1L170 272 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 FRKP42685 505 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 TAS2R38P59533 333 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 POU6F2P78424 691 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 CATSPEREQ5SY80 951 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 OR2G6Q5TZ20 316 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 PDZD3Q86UT5 571 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 APCDD1Q8J025 514 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 C12orf76Q8N812 135 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 WDR20Q8TBZ3 569 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 POLDIP3Q9BY77 421 aaKnown RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 J3KTA2 159 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 APEX1P27695 318 aaKnown RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 RNF144AP50876 292 aaPredicted RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 PRSS58Q8IYP2 241 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 CNN2Q99439 309 aaKnown RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 C11orf54Q9H0W9 315 aaPredicted RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 CHMP1AQ9HD42 196 aaPredicted RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 GLS2Q9UI32 602 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 RASD1Q9Y272 281 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 TMX2-CTNND1H3BSU7 103 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 ARPC1BO15143 372 aaKnown RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 BTN1A1Q13410 526 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 HSF5Q4G112 596 aaPredicted RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 ARSKQ6UWY0 536 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 IRF7Q92985 503 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 SLC35B4Q969S0 331 aa18.33■□□□□ 0.53
SUDS3-204ENST00000543473 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.33■□□□□ 0.53
SUDS3-204ENST00000543473 RRAS2P62070 204 aaPredicted RBP18.33■□□□□ 0.52
SUDS3-204ENST00000543473 ARHGAP11AQ6P4F7 1023 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 DNM1P34Q6PK57 102 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 DHRS4L2Q6PKH6 230 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 LRRC28Q86X40 367 aaPredicted RBP18.33■□□□□ 0.52
SUDS3-204ENST00000543473 OR5W2Q8NH69 310 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 PHOSPHO1Q8TCT1 267 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 RIT1Q92963 219 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 S100PBPQ96BU1 408 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 SLC2A11Q9BYW1 496 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 SAP130Q9H0E3 1048 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 GPN3Q9UHW5 284 aaPredicted RBP18.33■□□□□ 0.52
SUDS3-204ENST00000543473 FEZF1A0PJY2 475 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 GJB3O75712 270 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 CTU2Q2VPK5 515 aaKnown RBP18.33■□□□□ 0.52
SUDS3-204ENST00000543473 ZNF805Q5CZA5 627 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 OR2M2Q96R28 347 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 CSNK1G1Q9HCP0 422 aa18.33■□□□□ 0.52
SUDS3-204ENST00000543473 YARS2Q9Y2Z4 477 aaKnown RBP18.33■□□□□ 0.52
SUDS3-204ENST00000543473 OR7A17O14581 309 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ACPPP15309 386 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 PTPN6P29350 595 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GIPRP48546 466 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ZSCAN1Q8NBB4 408 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 SLC7A6Q92536 515 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 NT5C3BQ969T7 300 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 NIPAL2Q9H841 368 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 AK6Q9Y3D8 172 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM221A6NGB7 291 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 SCDO00767 359 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 CDC40O60508 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ALX3O95076 343 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 DDOSTP39656 456 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ESCO2Q56NI9 601 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 CBARPQ8N350 705 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 HCAR2Q8TDS4 363 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ZDHHC1Q8WTX9 485 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 DGAT2Q96PD7 388 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 PTTG3PQ9NZH4 202 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MRPS17Q9Y2R5 130 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 NAP1L6A6NFF2 107 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 DRGXA6NNA5 263 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 TLX3O43711 291 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ADAM23O75077 832 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 SCG5P05408 212 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 VAMP2P63027 116 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 CRYZQ08257 329 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GK2Q14410 553 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 METAP1DQ6UB28 335 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 ZNF550Q7Z398 422 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MEX3DQ86XN8 651 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 OR52E2Q8NGJ4 325 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 METTL2AQ96IZ6 378 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 HS6ST2Q96MM7 605 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 SLC6A7Q99884 636 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms