RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ELP4Q96EB1 424 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF764Q96H86 408 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 DOCK7Q96N67 2140 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR2B2Q9GZK3 357 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LRTM1Q9HBL6 345 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SERHLQ9NQF3 203 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MID2Q9UJV3 735 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TRAF6Q9Y4K3 522 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 F8P00451 2351 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MTORP42345 2549 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 C17orf51A8MQB3 221 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RGS14O43566 566 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TYROBPO43914 113 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF500O60304 480 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TBX19O60806 448 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CBR3O75828 277 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LINC00032P0C843 101 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SDC1P18827 310 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SSTR2P30874 369 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FRKP42685 505 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ETV4P43268 484 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 WNT3P56703 355 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PSPHP78330 225 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GAB1Q13480 694 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PDE7AQ13946 482 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF385BQ569K4 471 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CES4AQ5XG92 561 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LARP4Q71RC2 724 aaKnown RBP eCLIP11.93□□□□□ -0.51e-7■□□□□ 11.3
TNFRSF1A-215ENST00000543359 SLC44A2Q8IWA5 706 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MREGQ8N565 214 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TNIP2Q8NFZ5 429 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 HOXB13Q92826 284 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ABTB1Q969K4 478 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TMCO6Q96DC7 493 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LMF2Q9BU23 707 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TAS2R9Q9NYW1 312 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 KLRF1Q9NZS2 232 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NTMQ9P121 344 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FBXL2Q9UKC9 423 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MAPRE3Q9UPY8 281 aa11.93□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FADS1O60427 444 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZIC3O60481 467 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CYP4B1P13584 511 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TIMP3P35625 211 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GFRA1P56159 465 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 EFR3AQ14156 821 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CYP27C1Q4G0S4 372 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 XKR7Q5GH72 579 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ANKRD26P1Q6NSI1 321 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZCCHC23Q6ZST2 131 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF551Q7Z340 670 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 WDR53Q7Z5U6 358 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PLCZ1Q86YW0 608 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CLYBLQ8N0X4 340 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TWIST2Q8WVJ9 160 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CIDECQ96AQ7 238 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 EFHD2Q96C19 240 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CCT7Q99832 543 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 G6PC3Q9BUM1 346 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RTN4RQ9BZR6 473 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MIEF1Q9NQG6 463 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FLRT3Q9NZU0 649 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FIS1Q9Y3D6 152 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 WIF1Q9Y5W5 379 aa11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NUP214P35658 2090 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CD8B2A6NJW9 211 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 HSPB2A8KAH6 182 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FAM47E-STBD1D6RA91 191 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SYT5O00445 386 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PIP5K1BO14986 540 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 COQ9O75208 318 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ACTL6AO96019 429 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 BPGMP07738 259 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NEFHP12036 1026 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 BCKDHAP12694 445 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CPN1P15169 458 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NTSP30990 170 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SRD5A2P31213 254 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LHX2P50458 406 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF136P52737 540 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 B3GALT5-AS1P59052 145 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TLE4Q04727 773 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IFFO1Q0D2I5 559 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF155Q12901 538 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 HSPB2Q16082 182 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SLC25A35Q3KQZ1 300 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms