RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FIGLAQ6QHK4 219 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 SYT14Q8NB59 555 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 GNPDA2Q8TDQ7 276 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 UBTD2Q8WUN7 234 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 HRASLS5Q96KN8 279 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 GLIPR2Q9H4G4 154 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TCF7L1Q9HCS4 588 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 DLGAP1O14490 977 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 HNRNPA1P09651 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
VARS2-212ENST00000542001 NDUFV2P19404 249 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 GNALP38405 381 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 MNDAP41218 407 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 CTBSQ01459 385 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PON3Q15166 354 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 UNC5DQ6UXZ4 953 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 Q6ZNX1 250 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SHISA6Q6ZSJ9 500 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SERPINA12Q8IW75 414 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 NLGN4YQ8NFZ3 816 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 LMX1AQ8TE12 382 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SMAP2Q8WU79 429 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 HSPA12BQ96MM6 686 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 ABCG5Q9H222 651 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TRIM36Q9NQ86 728 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PRSS16Q9NQE7 514 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 EIF3KQ9UBQ5 218 aaKnown RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 TMEFF2Q9UIK5 374 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 HCN2Q9UL51 889 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SPTA1P02549 2419 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SLC5A10A0PJK1 596 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 RCBTB2O95199 551 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 KCNJ10P78508 379 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 RPL6Q02878 288 aaKnown RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 GGTA1PQ4G0N0 100 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 EIPR1Q53HC9 387 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TTLL10Q6ZVT0 673 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 OR8H3Q8N146 312 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 ACBD7Q8N6N7 88 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SLC41A3Q96GZ6 507 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 ADAD1Q96M93 576 aaKnown RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 DGAT2Q96PD7 388 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 CSF3RQ99062 836 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 GINS4Q9BRT9 223 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TMEM168Q9H0V1 697 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 STUB1Q9UNE7 303 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 INMT-MINDY4F8WBC2 141 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 AREL1O15033 823 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 RDH16O75452 317 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 AIFM1O95831 613 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 ADH7P40394 386 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 BNC1Q01954 994 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PRR22Q8IZ63 422 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TOMM5Q8N4H5 51 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 CSNK1A1LQ8N752 337 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 SLC16A11Q8NCK7 471 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 ZNF248Q8NDW4 579 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TM4SF18Q96CE8 201 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PTCHD1Q96NR3 888 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 HEBP2Q9Y5Z4 205 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 CCDC85CA6NKD9 419 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 DNAJB5O75953 348 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PPP1R3DO95685 299 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PLGP00747 810 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 S100A1P23297 94 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 POU6F2P78424 691 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
VARS2-212ENST00000542001 PDCD10Q9BUL8 212 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 PHF11Q9UIL8 331 aa15.17■□□□□ 0.02
VARS2-212ENST00000542001 A0A0A6YYC8 382 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 ANXA2P2A6NMY6 339 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 I3L1I5 382 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 YY2O15391 372 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 CSTAP01040 98 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 ANXA2P07355 339 aaKnown RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 NDUFA9Q16795 377 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 TP53I3Q53FA7 332 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 UCN3Q969E3 161 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 TGM7Q96PF1 710 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 MCCC1Q96RQ3 725 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 ZDHHC5Q9C0B5 715 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 SPHK1Q9NYA1 384 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 MYEF2Q9P2K5 600 aaKnown RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 RWDD3Q9Y3V2 267 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 FKBP7Q9Y680 259 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 DOCK6Q96HP0 2047 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 TRBV5-4A0A0C4DH59 114 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 PSMB10P40306 273 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 GBX2P52951 348 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 RAB15P59190 212 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 EIF4EBP2Q13542 120 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 LTBP1Q14766 1721 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 THOC7Q6I9Y2 204 aaKnown RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 ZNF613Q6PF04 617 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 Q6ZNB5 142 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 CADM3Q8N126 398 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 ADAMTS19Q8TE59 1207 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 TNFAIP8L1Q8WVP5 186 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 C17orf50Q8WW18 174 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms