RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PIK3R3Q92569 461 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 CDS1Q92903 461 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 FGF13Q92913 245 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 PPP1R16AQ96I34 528 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 KXD1Q9BQD3 176 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
INO80E-203ENST00000540562 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 CCDC86Q9H6F5 360 aaKnown RBP13.25□□□□□ -0.29
INO80E-203ENST00000540562 DDX31Q9H8H2 851 aaKnown RBP13.25□□□□□ -0.29
INO80E-203ENST00000540562 FBXO34Q9NWN3 711 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 DSPPQ9NZW4 1301 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 HYKKA2RU49 373 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 CENPXA8MT69 81 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 LDB3O75112 727 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 COQ9O75208 318 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 PDE9AO76083 593 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 IFI30P13284 250 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 INPP1P49441 399 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 TGM3Q08188 693 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 AGERQ15109 404 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 NNATQ16517 81 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 SLC27A4Q6P1M0 643 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 PLBD1Q6P4A8 553 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 RPTNQ6XPR3 784 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 NUP43Q8NFH3 380 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 GRHL3Q8TE85 626 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 KCTD7Q96MP8 289 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 OR7D2Q96RA2 312 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 DPH1Q9BZG8 443 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 SRRQ9GZT4 340 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 BEX1Q9HBH7 125 aa13.25□□□□□ -0.29
INO80E-203ENST00000540562 TSPAN11A1L157 253 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 OR2W5A6NFC9 320 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CDC42EP2O14613 210 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 GUCY1B2O75343 617 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CLUP10909 449 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 DRD3P35462 400 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 C12orf73Q69YU5 71 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 FIGNL1Q6PIW4 674 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CPOQ8IVL8 374 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SUN3Q8TAQ9 357 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 DACT3Q96B18 629 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 WDR34Q96EX3 536 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SAMD8Q96LT4 415 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CTRCQ99895 268 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 RPP25Q9BUL9 199 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 PLEKHB1Q9UF11 243 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 PLXNA2O75051 1894 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 OR6C70A6NIJ9 312 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 PLOD3O60568 738 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 MRPS14O60783 128 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 SRPRAP08240 638 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 WNT4P56705 351 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 RHAGQ02094 409 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 ZNF542PQ5EBM4 170 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 IDNKQ5T6J7 187 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 IKBIPQ70UQ0 350 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 OR51A7Q8NH64 312 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SPRYD4Q8WW59 207 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 ZNF707Q96C28 371 aaPredicted RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 FBXL4Q9UKA2 621 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 A0A0B4J293 547 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 DPM1O60762 260 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 PVRP15151 417 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SMSP52788 366 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 HCCSP53701 268 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 ENTPD8Q5MY95 495 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 KIAA1211LQ6NV74 962 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 TUBA3EQ6PEY2 450 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 UBQLNLQ8IYU4 475 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CREB3L4Q8TEY5 395 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SETD7Q8WTS6 366 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 PATE1Q8WXA2 126 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 CITED4Q96RK1 184 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 MCHR1Q99705 422 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
INO80E-203ENST00000540562 ENOPH1Q9UHY7 261 aa13.24□□□□□ -0.29
INO80E-203ENST00000540562 SLC7A7Q9UM01 511 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms