RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 KCNJ15Q99712 375 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 DUSP26Q9BV47 211 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 BBS2Q9BXC9 721 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF717Q9BY31 904 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 WNT10AQ9GZT5 417 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MIXL1Q9H2W2 232 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SARS2Q9NP81 518 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 EMC7Q9NPA0 242 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 RAD18Q9NS91 495 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FARSBQ9NSD9 589 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 DNAJC11Q9NVH1 559 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 USP36Q9P275 1121 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TNFRSF10DQ9UBN6 386 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 VPS29Q9UBQ0 182 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 PLEKHB1Q9UF11 243 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ELF5Q9UKW6 265 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 PCOLCE2Q9UKZ9 415 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TMPRSS11EQ9UL52 423 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FZD4Q9ULV1 537 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ING4Q9UNL4 249 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SLC27A6Q9Y2P4 619 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GSTK1Q9Y2Q3 226 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF451Q9Y4E5 1061 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ANKRD36A6QL64 1941 aa7.21□□□□□ -1.25
CCDC60-204ENST00000539847 A0A087WV48 116 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 A0A0G2JMP0 313 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TRDV1A0A1B0GX56 115 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SLC12A8A0AV02 714 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM129A0AVI4 362 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SNTNA6NMZ2 147 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 C12orf71A8MTZ7 269 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SHISA8B8ZZ34 492 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 H0YIV9 168 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 GFYI3L273 518 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SCAMP2O15127 329 aaKnown RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 FLRT2O43155 660 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SSX4O60224 188 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SLC19A2O60779 497 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SLC22A5O76082 557 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 DIRAS1O95057 198 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 EPHX1P07099 455 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HIST1H2AGP0C0S8 130 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TSPAN19P0C672 248 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HSMCR30P0CW71 290 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 COX7A2P14406 83 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 POU3F2P20265 443 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HIST1H2ADP20671 130 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TACR1P25103 407 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ACRV1P26436 265 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 NSG1P42857 185 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 MAPK9P45984 424 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 EVX1P49640 407 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 CRYBA2P53672 197 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 PCBP3P57721 371 aaKnown RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 EEF1A2Q05639 463 aaKnown RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ACSM1Q08AH1 577 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 NFATC2Q13469 925 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 EXOC3L2Q2M3D2 409 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 COL28A1Q2UY09 1125 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SGO1Q5FBB7 561 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 PLEKHS1Q5SXH7 462 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 GCNT6Q5T4J0 391 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ZBTB37Q5TC79 503 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 RNF219Q5W0B1 726 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 NADSYN1Q6IA69 706 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 LAMTOR1Q6IAA8 161 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 MZT2AQ6P582 158 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TRIM40Q6P9F5 258 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 IKBIPQ70UQ0 350 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM25Q86YD3 366 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 BBS7Q8IWZ6 715 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 PHC2Q8IXK0 858 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 GPALPP1Q8IXQ4 340 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 OXR1Q8N573 874 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 UTP15Q8TED0 518 aaKnown RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ASB11Q8WXH4 323 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 APIPQ96GX9 242 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 DIRAS2Q96HU8 199 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TPD52L3Q96J77 140 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HIST1H2AHQ96KK5 128 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 QRFPRQ96P65 431 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 FYTTD1Q96QD9 318 aaKnown RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HBEGFQ99075 208 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 HIST1H2AJQ99878 128 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 H2AFJQ9BTM1 129 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 GPR63Q9BZJ6 419 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 UCK2Q9BZX2 261 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 RNF167Q9H6Y7 350 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TRIM45Q9H8W5 580 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 AMBNQ9NP70 447 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ABCB9Q9NP78 766 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 FGF20Q9NP95 211 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TIGARQ9NQ88 270 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 PLSCR3Q9NRY6 295 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM184CQ9NVA4 438 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 WSB2Q9NYS7 404 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-204ENST00000539847 LSM7Q9UK45 103 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms