RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 FAM83FQ8NEG4 500 aaPredicted RBP3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 GPRC5AQ8NFJ5 357 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 OR13C9Q8NGT0 318 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF461Q8TAF7 563 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 UBTD2Q8WUN7 234 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SSMEM1Q8WWF3 244 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC38A4Q969I6 547 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 PYCR2Q96C36 320 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 RAB39BQ96DA2 213 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 LMLNQ96KR4 655 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF317Q96PQ6 595 aaPredicted RBP3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 KRT12Q99456 494 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM175Q9BSA9 504 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC2A11Q9BYW1 496 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SPRTNQ9H040 489 aaPredicted RBP3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ESRP2Q9H6T0 727 aaKnown RBP3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SMYD3Q9H7B4 428 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 PPP1R3EQ9H7J1 279 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ANKRA2Q9H9E1 313 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 Q9N2K0 584 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 UFSP2Q9NUQ7 469 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 SMOXQ9NWM0 555 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 HMGXB4Q9UGU5 601 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF639Q9UID6 485 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 PSORS1C1Q9UIG5 152 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ATPIF1Q9UII2 106 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 ADAM21Q9UKJ8 722 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 RNF24Q9Y225 148 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 PPIL1Q9Y3C6 166 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 PAM16Q9Y3D7 125 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 NOTCH1P46531 2555 aa3.49□□□□□ -1.85
AC055720.1-201ENST00000539552 RGPD2P0DJD1 1756 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ZMYM6O95789 1325 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CENPEQ02224 2701 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 E9PMD0 336 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 NPIPA3F8WFD2 350 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SGK494L7N484 410 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 PDLIM1O00151 329 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RHODO00212 210 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 KCNN4O15554 427 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 OR1F1O43749 312 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CALUO43852 315 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 LDB3O75112 727 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GLRA3O75311 464 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 STX11O75558 287 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RPS6KA5O75582 802 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 NDUFA7O95182 113 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GOT2P00505 430 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 PGK1P00558 417 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 APRTP07741 180 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ACAA1P09110 424 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CYP2D6P10635 497 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 EGR2P11161 476 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ENO3P13929 434 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GP9P14770 177 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 NT5EP21589 574 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ACKR3P25106 362 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 PSMA2P25787 234 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 NAA10P41227 235 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CCT3P49368 545 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RAD23BP54727 409 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CDH6P55285 790 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TSPAN5P62079 268 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 HERV-K104P63124 156 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 MAT1AQ00266 395 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 LRRC63Q05C16 580 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 FOXM1Q08050 763 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 PJVKQ0ZLH3 352 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TROAPQ12815 778 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 PKP1Q13835 747 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RCAN2Q14206 197 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TGFBIQ15582 683 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ZSWIM7Q19AV6 140 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GRTP1Q5TC63 336 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 C20orf194Q5TEA3 1177 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 LCN1P1Q5VSP4 162 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 LIPKQ5VXJ0 399 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 HIST2H2AA3Q6FI13 130 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ANKRD54Q6NXT1 300 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TRIM65Q6PJ69 517 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GPRIN3Q6ZVF9 776 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 NLRP9Q7RTR0 991 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CHSY1Q86X52 802 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 BMPERQ8N8U9 685 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SPATA3Q8NHX4 192 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CDC26Q8NHZ8 85 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ASB10Q8WXI3 467 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ST8SIA1Q92185 356 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ELMO1Q92556 727 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 COQ8BQ96D53 544 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC47A1Q96FL8 570 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 P2RY11Q96G91 374 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SGK494Q96LW2 274 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 VSTM2LQ96N03 204 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 ALS2CR12Q96Q35 445 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 HAUS8Q9BT25 410 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TRMT61BQ9BVS5 477 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GATA5Q9BWX5 397 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms