RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LOC100506127A0A0U1RQW1 187 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 C2orf74A8MZ97 194 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CCRL2O00421 344 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TNFP01375 233 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 OCM2P0CE71 109 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 OCMP0CE72 109 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TLX1P31314 330 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 COL19A1Q14993 1142 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TRAM2Q15035 370 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 SYT14P1Q58G82 188 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TYW3Q6IPR3 259 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 GJD3Q8N144 294 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CACTIN-AS1Q8N1I8 211 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CHCHD6Q9BRQ6 235 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CDADC1Q9BWV3 514 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 IL21RQ9HBE5 538 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 SLC13A4Q9UKG4 626 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF860A6NHJ4 632 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ZSCAN9O15535 394 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TLX2O43763 284 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CSO75390 466 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 NTN1O95631 604 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 AGR2O95994 175 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 THY1P04216 161 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 SCG5P05408 212 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ACP2P11117 423 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 PORP16435 677 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF10P21506 573 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 OMPP47874 163 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 PSMD7P51665 324 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 DUSP5Q16690 384 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 MEX3DQ86XN8 651 aaKnown RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 SLC37A2Q8TED4 501 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 MROQ9BYG7 248 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 HHATLQ9HCP6 504 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 GPR27Q9NS67 375 aa13.1□□□□□ -0.31
LIMK1-208ENST00000538333 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-208ENST00000538333 A0A0J9YY10 115 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 CYR61O00622 381 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 RANBP1P43487 201 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 AVPR1BP47901 424 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 SMSP52788 366 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 HOXC5Q00444 222 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 TSPAN31Q12999 210 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 OXA1LQ15070 435 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 TRMT12Q53H54 448 aaKnown RBP13.09□□□□□ -0.31
LIMK1-208ENST00000538333 SNX29P2Q8IUI4 249 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 AMER2Q8N7J2 671 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 TMEM52Q8NDY8 209 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 OR8D4Q8NGM9 314 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 RERGQ96A58 199 aaPredicted RBP13.09□□□□□ -0.31
LIMK1-208ENST00000538333 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
LIMK1-208ENST00000538333 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
LIMK1-208ENST00000538333 NTNG1Q9Y2I2 539 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
LIMK1-208ENST00000538333 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
LIMK1-208ENST00000538333 KIR2DS5A0A0G2JLQ3 304 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 A0A0G2JNG1 304 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 SPTY2D1-AS1A0A0U1RR47 76 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 KIR2DS3K7RE56 304 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 FGF17O60258 216 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 ATP1B1P05026 303 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 HBQ1P09105 142 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 CKMT1AP12532 417 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.31
LIMK1-208ENST00000538333 CCR5P51681 352 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.31
LIMK1-208ENST00000538333 ID2Q02363 134 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 KIR2DS5Q14953 304 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 MANEAQ5SRI9 462 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 LRR1Q96L50 414 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF582Q96NG8 517 aaPredicted RBP13.08□□□□□ -0.31
LIMK1-208ENST00000538333 SDF2Q99470 211 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 KLHL28Q9NXS3 571 aa13.08□□□□□ -0.31
LIMK1-208ENST00000538333 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms