RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DCAF4Q8WV16 495 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MAL2Q969L2 176 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMEM41AQ96HV5 264 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SCLYQ96I15 445 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF75AQ96N20 296 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMEM209Q96SK2 561 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 THAP7Q9BT49 309 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMED9Q9BVK6 235 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TAPBPLQ9BX59 468 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 NLNQ9BYT8 704 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LMAN2LQ9H0V9 348 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TBC1D17Q9HA65 648 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SEBOXQ9HB31 216 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF334Q9HCZ1 680 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ENAMQ9NRM1 1142 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 AKAP7Q9P0M2 348 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 MBD2Q9UBB5 411 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MGAT4CQ9UBM8 478 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MBD1Q9UIS9 605 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 DLGAP4Q9Y2H0 992 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 FAM96BQ9Y3D0 163 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MRPS23Q9Y3D9 190 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 CBY1Q9Y3M2 126 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 KCTD3Q9Y597 815 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SNX11Q9Y5W9 270 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SPIN1Q9Y657 262 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ARID2Q68CP9 1835 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MEIKINA0A087WXM9 373 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LOC390937A0A1W2PQ73 354 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF705EA8MWA4 302 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MCRIP1C9JLW8 97 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 J3KR12 359 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CDC7O00311 574 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 EREGO14944 169 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PMM2O15305 246 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TRIM3O75382 744 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 MATN4O95460 622 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 HPP00738 406 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 EIF4EP06730 217 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 THP07101 528 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ANXA2P07355 339 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 MYL3P08590 195 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 H2AFB1P0C5Y9 115 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 H2AFB2P0C5Z0 115 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 EPXP11678 715 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LCP1P13796 627 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SNRPBP14678 240 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ST6GAL1P15907 406 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF25P17030 456 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 BPIP17213 487 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ITGA3P26006 1051 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PTPN3P26045 913 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PDHA2P29803 388 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MPIP34949 423 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RAD52P43351 418 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 VEGFCP49767 419 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 AFF1P51825 1210 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 EPHA4P54764 986 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 BLOC1S1P78537 153 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 NFKB2Q00653 900 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 HMGCS1Q01581 520 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SEMG2Q02383 582 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PPA1Q15181 289 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SF3A2Q15428 464 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 C6orf136Q5SQH8 315 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ATAT1Q5SQI0 421 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 IDNKQ5T6J7 187 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FAM27D1Q5T7N8 215 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LIPNQ5VXI9 398 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF660Q6AZW8 331 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 H3F3CQ6NXT2 135 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FIGNL1Q6PIW4 674 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 Q6ZSR9 355 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMUB2Q71RG4 321 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 DPPA4Q7L190 304 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMPRSS11BQ86T26 416 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SLC43A2Q8N370 569 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR5T3Q8NGG3 340 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ELP5Q8TE02 316 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FCGR1BQ92637 280 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CREB3L1Q96BA8 519 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TIFAQ96CG3 184 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FAM120BQ96EK7 910 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 C14orf79Q96F83 325 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TSPAN17Q96FV3 270 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LRIG1Q96JA1 1093 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZC3H10Q96K80 434 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZFP42Q96MM3 310 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 WDFY2Q96P53 400 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CLCC1Q96S66 551 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ABHD1Q96SE0 405 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 GPR21Q99679 349 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MICU1Q9BPX6 476 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ORAI3Q9BRQ5 295 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 C20orf24Q9BUV8 137 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 GSDMCQ9BYG8 508 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TPSD1Q9BZJ3 242 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms