RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CCDC154A6NI56 674 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 OR6C70A6NIJ9 312 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 RFXANKO14593 260 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 REM1O75628 298 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 KCNH1O95259 989 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
RPAIN-205ENST00000536255 ALOX5P09917 674 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 MEOX1P50221 254 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GNGT1P63211 74 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 EFR3AQ14156 821 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 RCAN2Q14206 197 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 LASP1Q14847 261 aaKnown RBP12.44□□□□□ -0.42
RPAIN-205ENST00000536255 TIGD2Q4W5G0 525 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 AGKQ53H12 422 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 TBCELQ5QJ74 424 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 CGB2Q6NT52 195 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GFRALQ6UXV0 394 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 NPSR1Q6W5P4 371 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 OR10G3Q8NGC4 313 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 OR5M3Q8NGP4 307 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GOT1L1Q8NHS2 421 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GPR151Q8TDV0 419 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 PAQR8Q8TEZ7 354 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 JADE3Q92613 823 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 HOXB13Q92826 284 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-205ENST00000536255 TMBIM1Q969X1 311 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 TMCO6Q96DC7 493 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 ITCHQ96J02 903 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 STACQ99469 402 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 ACTRT3Q9BYD9 372 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 DUSP22Q9NRW4 184 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GIN1Q9NXP7 522 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 COL12A1Q99715 3063 aa12.44□□□□□ -0.42
RPAIN-205ENST00000536255 GMNCA6NCL1 334 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 DUXAA6NLW8 204 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 NPIPA5E9PKD4 350 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 HS6ST1O60243 411 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 NME6O75414 186 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 WISP2O76076 250 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 NKX2-2O95096 273 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ANP32DO95626 131 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CCL3P10147 92 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CNR1P21554 472 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 GABRA3P34903 492 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CHI3L1P36222 383 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ZFP36L2P47974 494 aaKnown RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 PNLIPRP2P54317 469 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 FBXW4P57775 412 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 GPR85P60893 370 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 GAB1Q13480 694 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 KRTCAP3Q53RY4 240 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 RNFT1Q5M7Z0 435 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CDC73Q6P1J9 531 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 BLOC1S3Q6QNY0 202 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 GK5Q6ZS86 529 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ZNF621Q6ZSS3 439 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 C6orf120Q7Z4R8 191 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CPLX4Q7Z7G2 160 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ZFP62Q8NB50 900 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 OR5AK3PQ8NH89 298 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SPPL2AQ8TCT8 520 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ADAMTS15Q8TE58 950 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 DIO2Q92813 273 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SPDL1Q96EA4 605 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SLC35A4Q96G79 324 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 GPR137Q96N19 417 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 COL21A1Q96P44 957 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 FAM173AQ9BQD7 235 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SLC35A5Q9BS91 424 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 TSPAN10Q9H1Z9 355 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SH2D2AQ9NP31 389 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 ERRFI1Q9UJM3 462 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 NPIPA1Q9UND3 350 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
RPAIN-205ENST00000536255 CHCHD2Q9Y6H1 151 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-205ENST00000536255 POLEQ07864 2286 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 ANKRD33BA6NCL7 494 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 NR5A2O00482 541 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 TFECO14948 347 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-205ENST00000536255 KRT75O95678 551 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 AGR2O95994 175 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 STSP08842 583 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 PIGAP37287 484 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 RFC3P40938 356 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 MAP3K8P41279 467 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 TRPC1P48995 793 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 ANXA11P50995 505 aaKnown RBP12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SEC24CP53992 1094 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 GYS2P54840 703 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPAIN-205ENST00000536255 C4orf17Q53FE4 359 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 C6orf10Q5SRN2 563 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 TMEM81Q6P7N7 255 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SPATA21Q7Z572 469 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms