RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ILKQ13418 452 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 EXOSC2Q13868 293 aaKnown RBP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 MMP21Q8N119 569 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM19Q96HH6 336 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 ZNF354BQ96LW1 612 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 MENTQ9BUN1 341 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 IFT22Q9H7X7 185 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 PRKAG2Q9UGJ0 569 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 SLC6A14Q9UN76 642 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 PDE4DIPQ5VU43 2346 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 NDUFS4O43181 175 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 B3GALNT1O75752 331 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 OSMP13725 252 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 SNRPGP62308 76 aaKnown RBP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 ABATP80404 500 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 FGFBP1Q14512 234 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 GANABQ14697 944 aaKnown RBP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM35AQ53FP2 167 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 PIP5KL1Q5T9C9 394 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 C19orf18Q8NEA5 215 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 CREB3L4Q8TEY5 395 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 PHF21AQ96BD5 680 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 RAB11FIP5Q9BXF6 653 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM121BQ9BXQ6 578 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-203ENST00000535977 TEX101Q9BY14 249 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 SLAMF7Q9NQ25 335 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 DSPPQ9NZW4 1301 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ZNF670-ZNF695F2Z2N8 137 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ORC5O43913 435 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 RECKO95980 971 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 PCCBP05166 539 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 EPHX1P07099 455 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 APEX1P27695 318 aaKnown RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 KCNJ5P48544 419 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ZNF273Q14593 569 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 KLHL12Q53G59 568 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 DCST1Q5T197 706 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 MZT2BQ6NZ67 158 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 TNFAIP8L2Q6P589 184 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 LINC00471Q8N535 108 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 MARVELD1Q9BSK0 173 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 FAIM2Q9BWQ8 316 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 IFT46Q9NQC8 304 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 CUEDC1Q9NWM3 386 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 NDOR1Q9UHB4 597 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ZNF175Q9Y473 711 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 LOC102723532A0A0G2JNH3 316 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 IGLON5A6NGN9 336 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 H7BY64 318 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 SLC43A1O75387 559 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 CDRT1O95170 752 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 CRYBB2P43320 205 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 MEDAGQ5VYS4 303 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 TRIQKQ629K1 86 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 SLC34A3Q8N130 599 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 SIRT3Q9NTG7 399 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 P2RX2Q9UBL9 471 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ING4Q9UNL4 249 aa16.87■□□□□ 0.29
RAB40C-203ENST00000535977 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 PCYT1BQ9Y5K3 369 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-203ENST00000535977 A0A1W2PPV9 198 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 OTOL1A6NHN0 477 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 WWP2O00308 870 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 NUPL2O15504 423 aaKnown RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 POU2F1P14859 743 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 TPMTP51580 245 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 ARFIP1P53367 373 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 HNRNPA0Q13151 305 aaKnown RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 OR4C11Q6IEV9 310 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 KIAA1161Q6NSJ0 714 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 BADQ92934 168 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 LINC00052Q96N35 136 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 SORCS2Q96PQ0 1159 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 SPATA5L1Q9BVQ7 753 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 C1QTNF6Q9BXI9 259 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 TRPV4Q9HBA0 871 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 ZFP64Q9NPA5 681 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 RTCAO00442 366 aaKnown RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 HMGN4O00479 90 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 FFAR1O14842 300 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 LYRM1O43325 122 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 OR1F1O43749 312 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 PROS1P07225 676 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 H1F0P07305 194 aaKnown RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 PRKAR1AP10644 381 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 SLC2A2P11168 524 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-203ENST00000535977 PPP2R1BP30154 601 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 CNR2P34972 360 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 LIM2P55344 173 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 HSPB3Q12988 150 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 FCN2Q15485 313 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 PLAG1Q6DJT9 500 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 GHDCQ8N2G8 530 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 OR11H4Q8NGC9 324 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 MSLNLQ96KJ4 702 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms