RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 C2orf54Q08AI8 447 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 ZNF628Q5EBL2 1059 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 C20orf204Q6ZNR8 217 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 LARP4Q71RC2 724 aaKnown RBP eCLIP19.25■□□□□ 0.67
SSH3-211ENST00000534112 UBQLNLQ8IYU4 475 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 GBP7Q8N8V2 638 aaPredicted RBP19.25■□□□□ 0.67
SSH3-211ENST00000534112 PPP1R14CQ8TAE6 165 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 ZNF675Q8TD23 568 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 RNF138Q8WVD3 245 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 SELENOMQ8WWX9 145 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 MARK4Q96L34 752 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 HS3ST6Q96QI5 342 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 BRF2Q9HAW0 419 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 TMCO1Q9UM00 188 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 COL6A5A8TX70 2615 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 ROS1P08922 2347 aa19.25■□□□□ 0.67
SSH3-211ENST00000534112 C17orf51A8MQB3 221 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 C16orf97H3BN30 126 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 PPP6CO00743 305 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 PEPDP12955 493 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 POU2F1P14859 743 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 KRT20P35900 424 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 CLDN15P56746 228 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 TRA2BP62995 288 aaKnown RBP19.24■□□□□ 0.67
SSH3-211ENST00000534112 RPS27LQ71UM5 84 aaKnown RBP19.24■□□□□ 0.67
SSH3-211ENST00000534112 C1orf52Q8N6N3 182 aaKnown RBP19.24■□□□□ 0.67
SSH3-211ENST00000534112 OR4K17Q8NGC6 315 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 FIG4Q92562 907 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 KAT2AQ92830 837 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 ERP27Q96DN0 273 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 VSTM2LQ96N03 204 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 PIGQQ9BRB3 760 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 PFDN4Q9NQP4 134 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 NMRK1Q9NWW6 199 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 ATRQ13535 2644 aa19.24■□□□□ 0.67
SSH3-211ENST00000534112 INAFM1C9JVW0 142 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 CGAP01215 116 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 IL12BP29460 328 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 KCNJ5P48544 419 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 PNLIPRP2P54317 469 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 DSCR4P56555 118 aaPredicted RBP19.23■□□□□ 0.67
SSH3-211ENST00000534112 SIRPAP78324 504 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 LETMD1Q6P1Q0 360 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 NPSR1Q6W5P4 371 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 ZNF550Q7Z398 422 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 C17orf53Q8N3J3 647 aaPredicted RBP19.23■□□□□ 0.67
SSH3-211ENST00000534112 MEIOBQ8N635 442 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 ZC3HAV1LQ96H79 300 aaKnown RBP19.23■□□□□ 0.67
SSH3-211ENST00000534112 ZNF845Q96IR2 970 aaPredicted RBP19.23■□□□□ 0.67
SSH3-211ENST00000534112 GSX2Q9BZM3 304 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 RAB17Q9H0T7 212 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 XPR1Q9UBH6 696 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
SSH3-211ENST00000534112 H0YC42 278 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 EMC8O43402 210 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 SMIM24O75264 130 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 TNFRSF21O75509 655 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 ESRRBO95718 433 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 OTCP00480 354 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 LOXP28300 417 aaPredicted RBP19.22■□□□□ 0.67
SSH3-211ENST00000534112 TPD52P55327 224 aaPredicted RBP19.22■□□□□ 0.67
SSH3-211ENST00000534112 EEFSECP57772 596 aaKnown RBP19.22■□□□□ 0.67
SSH3-211ENST00000534112 PSPHP78330 225 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 PPP2R2BQ00005 443 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 ERCC6LQ2NKX8 1250 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 FAM219BQ5XKK7 198 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 C22orf34Q6ZV56 151 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 FADS6Q8N9I5 356 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 ZNF610Q8N9Z0 462 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 LRRN4CLQ8ND94 238 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 OR4N2Q8NGD1 307 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 OR9A2Q8NGT5 310 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 EFHD2Q96C19 240 aaPredicted RBP19.22■□□□□ 0.67
SSH3-211ENST00000534112 HBEGFQ99075 208 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 DSN1Q9H410 356 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 VPS29Q9UBQ0 182 aa19.22■□□□□ 0.67
SSH3-211ENST00000534112 RPS17P08708 135 aaKnown RBP19.21■□□□□ 0.67
SSH3-211ENST00000534112 CTAGE8P0CG41 777 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 CD8BP10966 210 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 TSPAN8P19075 237 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 SUCLG1P53597 346 aaKnown RBP19.21■□□□□ 0.67
SSH3-211ENST00000534112 CDH13P55290 713 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 MRPS22P82650 360 aaKnown RBP19.21■□□□□ 0.67
SSH3-211ENST00000534112 SLC44A2Q8IWA5 706 aaPredicted RBP19.21■□□□□ 0.67
SSH3-211ENST00000534112 CTAGE4Q8IX94 777 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 PINK1Q9BXM7 581 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 RNF122Q9H9V4 155 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 FOLH1BQ9HBA9 442 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 PPP4R1LQ9P1A2 415 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 TRPS1Q9UHF7 1281 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 ZNF225Q9UK10 706 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 ZNF337Q9Y3M9 751 aa19.21■□□□□ 0.67
SSH3-211ENST00000534112 FBN1P35555 2871 aaKnown RBP19.2■□□□□ 0.66
SSH3-211ENST00000534112 CNOT4O95628 575 aaKnown RBP19.2■□□□□ 0.66
SSH3-211ENST00000534112 HK1P19367 917 aa19.2■□□□□ 0.66
SSH3-211ENST00000534112 EVI2BP34910 448 aa19.2■□□□□ 0.66
SSH3-211ENST00000534112 MAGEA12P43365 314 aa19.2■□□□□ 0.66
SSH3-211ENST00000534112 PTH2RP49190 550 aa19.2■□□□□ 0.66
SSH3-211ENST00000534112 FGFBP1Q14512 234 aa19.2■□□□□ 0.66
SSH3-211ENST00000534112 RAET1LQ5VY80 246 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms