RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TXNDC9O14530 226 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 HS3ST1O14792 307 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 POLR3GO15318 223 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CLOCKO15516 846 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TPD52L2O43399 206 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TCF21O43680 179 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 KIAA0513O60268 411 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PEX14O75381 377 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 LY6HO94772 140 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RCBTB2O95199 551 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 METTL18O95568 372 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 NTN1O95631 604 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC16A8O95907 504 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 C1QAP02745 245 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RPN2P04844 631 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 IFNA16P05015 189 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CD1AP06126 327 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 APOA4P06727 396 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 DANCRP0C864 163 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM228BP0C875 321 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CCDC166P0CW27 439 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 MYBL1P10243 752 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PKMP14618 531 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 EZRP15311 586 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CREB1P16220 341 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RHCEP18577 417 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TCEA1P23193 301 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 GATA3P23771 443 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 GDF1P27539 372 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 MPGP29372 298 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CD79BP40259 229 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 GRIA1P42261 906 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TNNT3P45378 269 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ATP5OP48047 213 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PNLIPRP1P54315 467 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 GEMP55040 296 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CASP9P55211 416 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TPD52P55327 224 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RPS4XP62701 263 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 KCNJ2P63252 427 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SIRPAP78324 504 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PLOD1Q02809 727 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF844Q08AG5 666 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 KLF9Q13886 244 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ITIH4Q14624 930 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 KCNJ11Q14654 390 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TOMM20Q15388 145 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TSC22D1Q15714 1073 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PGGHGQ32M88 737 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF791Q3KP31 576 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ACSBG2Q5FVE4 666 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PIGGQ5H8A4 983 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CTSL3PQ5NE16 218 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ANKRD20A2Q5SQ80 823 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ANKRD20A1Q5TYW2 823 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RNF220Q5VTB9 566 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ANKRD20A3Q5VUR7 823 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC22A10Q63ZE4 541 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 KCTD11Q693B1 232 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CAPN13Q6MZZ7 669 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 C11orf87Q6NUJ2 197 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 TTC23LQ6PF05 361 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SBSNQ6UWP8 590 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PACS1Q6VY07 963 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 HSDL2Q6YN16 418 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 MBOAT1Q6ZNC8 495 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 DGAT2L6Q6ZPD8 337 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ASPGQ86U10 573 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CA13Q8N1Q1 262 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 LRRC25Q8N386 305 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF611Q8N823 705 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CNEP1R1Q8N9A8 125 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 BANPQ8N9N5 519 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ZBTB34Q8NCN2 500 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SEMA6DQ8NFY4 1073 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 OR10G3Q8NGC4 313 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 OR52K1Q8NGK4 314 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 OR13J1Q8NGT2 312 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RDH11Q8TC12 318 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 UTP15Q8TED0 518 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 SMAP2Q8WU79 429 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PTPMT1Q8WUK0 201 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ABTB1Q969K4 478 aaPredicted RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RGMAQ96B86 450 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PPWD1Q96BP3 646 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 MSI2Q96DH6 328 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 PGM2Q96G03 612 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 VMP1Q96GC9 406 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CLPTM1LQ96KA5 538 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ERGIC2Q96RQ1 377 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 RHNO1Q9BSD3 238 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CARD6Q9BX69 1037 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 OR8D2Q9GZM6 311 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 NAT10Q9H0A0 1025 aaKnown RBP2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 GBA3Q9H227 469 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 HSD3B7Q9H2F3 369 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 CALHM2Q9HA72 323 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF226Q9NYT6 803 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 AIPL1Q9NZN9 384 aa2.66□□□□□ -1.98
CHMP4A-208ENST00000534106 ARMCX1Q9P291 453 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms