RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 A0A0A6YYD5 115 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR2W5A6NFC9 320 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 HSPB2A8KAH6 182 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 MRASO14807 208 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 GYG2O15488 501 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 SMPD2O60906 423 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 IFNA2P01563 188 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 IL6P05231 212 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 IL3P08700 152 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM58BPP0C7Q3 252 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 BMP7P18075 431 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 IL10P22301 178 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 S100A3P33764 101 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 CPOXP36551 454 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ASCL1P50553 236 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR4D2P58180 307 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 C21orf58P58505 322 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 GPR85P60893 370 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 TRA2BP62995 288 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC25A3Q00325 362 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 RCAN2Q14206 197 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 HSPB2Q16082 182 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM174BQ3ZCQ3 159 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 FBXL19-AS1Q494R0 122 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 SPANXN4Q5MJ08 99 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 RIPPLY2Q5TAB7 128 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 TMEM214Q6NUQ4 689 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 PODNL1Q6PEZ8 512 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ABHD13Q7L211 337 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ASRGL1Q7L266 308 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 RETREG3Q86VR2 466 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 TMEM132CQ8N3T6 1108 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 KIF2BQ8N4N8 673 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ACOT4Q8N9L9 421 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 RBM15BQ8NDT2 890 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR7A2PQ8NGA2 310 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 KLHL29Q96CT2 875 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 COQ8BQ96D53 544 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ROGDIQ9GZN7 287 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 LRMDAQ9H2I8 198 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 REEP4Q9H6H4 257 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 TIMMDC1Q9NPL8 285 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 MAPRE3Q9UPY8 281 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 EXO1Q9UQ84 846 aaKnown RBP10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ASB4Q9Y574 426 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 ATRQ13535 2644 aa10.41□□□□□ -0.74
TRAPPC4-213ENST00000533149 NBEAL1Q6ZS30 2694 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 CLCA1A8K7I4 914 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 BBIP1A8MTZ0 92 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 DVL2O14641 736 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ANGPT2O15123 496 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SCAMP2O15127 329 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 DNAJB6O75190 326 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 KRT16P08779 473 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 LAMP1P11279 417 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 COX7A2P14406 83 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ALOX12P18054 663 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 CERS1P27544 350 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 HPCAL1P37235 193 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 MTTPP55157 894 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PHC1P78364 1004 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PLGLB1Q02325 96 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 RUNX2Q13950 521 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 DEFB134Q4QY38 66 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 TIGD2Q4W5G0 525 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PAGE3Q5JUK9 113 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 C1orf185Q5T7R7 199 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 CPTPQ5TA50 214 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ANKRD26P1Q6NSI1 321 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC2A7Q6PXP3 512 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 IKBIPQ70UQ0 350 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC22A16Q86VW1 577 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 KIF18BQ86Y91 864 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 CYP4Z2PQ8N1L4 340 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ARMC10Q8N2F6 343 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZCCHC7Q8N3Z6 543 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 TMEM156Q8N614 296 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PCYOX1LQ8NBM8 494 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PIGTQ969N2 578 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 TESCQ96BS2 214 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR52E6Q96RD3 313 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PRPF18Q99633 342 aaKnown RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 PIP5K1AQ99755 562 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 YIPF4Q9BSR8 244 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZDHHC11Q9H8X9 412 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 COPS7BQ9H9Q2 264 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SH3BP4Q9P0V3 963 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 HCN3Q9P1Z3 774 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 LEF1Q9UJU2 399 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 ACAD8Q9UKU7 415 aa10.4□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC22A7Q9Y694 548 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms