RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PRICKLE4Q2TBC4 344 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 TRMT12Q53H54 448 aaKnown RBP17.21■□□□□ 0.35
SMPD1-208ENST00000533123 ZNF628Q5EBL2 1059 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 OR7G2Q8NG99 324 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 CYGBQ8WWM9 190 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 SDCCAG3Q96C92 435 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 RSPO3Q9BXY4 272 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-208ENST00000533123 PGM3O95394 542 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 CLIC3O95833 236 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 HEXBP07686 556 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 SDHBP21912 280 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 ZIK1Q3SY52 487 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-208ENST00000533123 WDR53Q7Z5U6 358 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-208ENST00000533123 SVOPLQ8N434 492 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 OR5K1Q8NHB7 308 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 RIT1Q92963 219 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 FBXL20Q96IG2 436 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 MESP1Q9BRJ9 268 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 PNO1Q9NRX1 252 aaKnown RBP17.21■□□□□ 0.35
SMPD1-208ENST00000533123 MAT2BQ9NZL9 334 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 BAG5Q9UL15 447 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 EMC8O43402 210 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 SLC28A2O43868 658 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 ETS2P15036 469 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 KHKP50053 298 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 CLCN2P51788 898 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 TXNL4AP83876 142 aaKnown RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 PRR5P85299 388 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 PPP2R2BQ00005 443 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 MYBPC1Q00872 1141 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 MGAT2Q10469 447 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 LSAMPQ13449 338 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 NCF4Q15080 339 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 LANCL3Q6ZV70 420 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 PIWIL3Q7Z3Z3 882 aaKnown RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 SLC30A8Q8IWU4 369 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 PLPP5Q8NEB5 264 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 NUP43Q8NFH3 380 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 OR56A1Q8NGH5 318 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 ANKRD60Q9BZ19 345 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 CXorf21Q9HAI6 301 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 C3orf18Q9UK00 162 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 TCRBV16S1A1N1A0A5B0 115 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 A8MUA0 341 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 TNNI3P19429 210 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 TCN2P20062 427 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 RBMS1P29558 406 aaKnown RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 EMP2P54851 167 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 FUT5Q11128 374 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 DUSP7Q16829 419 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 IFI44LQ53G44 452 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 BHLHB9Q6PI77 547 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 GALNT12Q8IXK2 581 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 DRAXINQ8NBI3 349 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 TREX2Q9BQ50 279 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 CRB3Q9BUF7 120 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 OSBPL10Q9BXB5 764 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 RUBCNLQ9H714 662 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 WDR54Q9H977 334 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 DDX18Q9NVP1 670 aaKnown RBP17.2■□□□□ 0.34
SMPD1-208ENST00000533123 NDUFAF4Q9P032 175 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 P2RX2Q9UBL9 471 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 PADI2Q9Y2J8 665 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 KCNE3Q9Y6H6 103 aa17.2■□□□□ 0.34
SMPD1-208ENST00000533123 HRKO00198 91 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 KLF7O75840 302 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 YAP1P46937 504 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 PGDP52209 483 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 ELOAQ14241 798 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 SLC36A3Q495N2 470 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 HMGN2P46Q86SG4 172 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 PATL1Q86TB9 770 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 LZICQ8WZA0 190 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 CTHRC1Q96CG8 243 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 C3orf14Q9HBI5 128 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 SH3GLB1Q9Y371 365 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 IFNA14P01570 189 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 BIKQ13323 160 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 SHQ1Q6PI26 577 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 VWA5B2Q8N398 1253 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 ZNF675Q8TD23 568 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 MOAP1Q96BY2 351 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 DTNBP1Q96EV8 351 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 GIMAP5Q96F15 307 aa17.19■□□□□ 0.34
SMPD1-208ENST00000533123 NXT1Q9UKK6 140 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 SAMHD1Q9Y3Z3 626 aaKnown RBP17.19■□□□□ 0.34
SMPD1-208ENST00000533123 C17orf105B2RV13 164 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 ALOX12BO75342 701 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 CHRM4P08173 479 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 NR2F1P10589 423 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 THRBP10828 461 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 MAP4K2Q12851 820 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 ZNF267Q14586 743 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-208ENST00000533123 EXOSC7Q15024 291 aaKnown RBP17.18■□□□□ 0.34
SMPD1-208ENST00000533123 OFCC1Q8IZS5 231 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 NLGN4XQ8N0W4 816 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 OR2L13Q8N349 312 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 DHRSXQ8N5I4 330 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms