RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MAPRE3Q9UPY8 281 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 TMEM114B3SHH9 223 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 SNRPB2P08579 225 aaKnown RBP27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 MAPK1P28482 360 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 KIR3DL1P43629 444 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 MRPS22P82650 360 aaKnown RBP27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 CRYZQ08257 329 aaKnown RBP27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 CYP27C1Q4G0S4 372 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 TNFAIP8L3Q5GJ75 292 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 MCEMP1Q8IX19 187 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 ULK2Q8IYT8 1036 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 WDSUB1Q8N9V3 476 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 ZFP28Q8NHY6 868 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 MTERF3Q96E29 417 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 ZBED6CLQ96FA7 236 aaPredicted RBP27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 C3orf30Q96M34 536 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 TIMP4Q99727 224 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 SLC6A5Q9Y345 797 aa27.63■■■□□ 2.01
SSSCA1-207ENST00000533115 WDR91A4D1P6 747 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 TM9SF1O15321 606 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 BIRC5O15392 142 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 SKAP2O75563 359 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 CBR3O75828 277 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 GPC1P35052 558 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 PTGER4P35408 488 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 FRKP42685 505 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 ZNHIT3Q15649 155 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 ATP6AP1LQ52LC2 224 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 NHSL2Q5HYW2 709 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 WIPI1Q5MNZ9 446 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 CES4AQ5XG92 561 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 R3HCC1LQ7Z5L2 792 aaKnown RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 CROCCP2Q86T23 111 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 FAM83FQ8NEG4 500 aaPredicted RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 RNF138Q8WVD3 245 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 LMF2Q9BU23 707 aaKnown RBP27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 SERHLQ9NQF3 203 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 CBLCQ9ULV8 474 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 WIF1Q9Y5W5 379 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 ACTL7BQ9Y614 415 aa27.62■■■□□ 2.01
SSSCA1-207ENST00000533115 PKDREJQ9NTG1 2253 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 HSPA4LO95757 839 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 MANFP55145 182 aaKnown RBP27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 GAB1Q13480 694 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 C6orf136Q5SQH8 315 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 VASNQ6EMK4 673 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 LRIG3Q6UXM1 1119 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 WDR53Q7Z5U6 358 aaPredicted RBP27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 ZBTB9Q96C00 473 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 Q9N2J8 555 aa27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 ACSS1Q9NUB1 689 aaPredicted RBP27.61■■■□□ 2.01
SSSCA1-207ENST00000533115 ADGRG4Q8IZF6 3080 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 FAM90A27PA6NNH2 459 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 AHRRA9YTQ3 701 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 LYPLA1O75608 230 aaPredicted RBP27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 SERPINE1P05121 402 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 PRPS2P11908 318 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 CYP4B1P13584 511 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 CHI3L2Q15782 390 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 DECR1Q16698 335 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 YRDCQ86U90 279 aaKnown RBP27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 PLCZ1Q86YW0 608 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 PGM2Q96G03 612 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 UCK2Q9BZX2 261 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 PRDM14Q9GZV8 571 aa27.6■■■□□ 2.01
SSSCA1-207ENST00000533115 A0A0G2JNJ9 132 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 NKX2-6A6NCS4 301 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 TTC36A6NLP5 189 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 FAM47E-STBD1D6RA91 191 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 ITM2AO43736 263 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 DHRS4L1P0CG22 281 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 DDX5P17844 614 aaKnown RBP27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 BMP7P18075 431 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 HPCAL1P37235 193 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 ADH7P40394 386 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 PM20D2Q8IYS1 436 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 C1orf50Q9BV19 199 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 UGT2B28Q9BY64 529 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 KCNK9Q9NPC2 374 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 KCNJ16Q9NPI9 418 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 Q9UFV3 132 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 ATP6V1HQ9UI12 483 aa27.59■■■□□ 2.01
SSSCA1-207ENST00000533115 SCAMP2O15127 329 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ZWINTO95229 277 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 RPL3P39023 403 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ZFP36L2P47974 494 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 GAS1P54826 345 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ABCE1P61221 599 aaKnown RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 MPP2Q14168 576 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 RIPPLY2Q5TAB7 128 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 FNDC5Q8NAU1 212 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ABTB1Q969K4 478 aaPredicted RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 TUBGCP3Q96CW5 907 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 SPOCK3Q9BQ16 436 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 OR2B2Q9GZK3 357 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ENKD1Q9H0I2 346 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 ZNF395Q9H8N7 513 aaPredicted RBP27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 EQTNQ9NQ60 294 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 NTMQ9P121 344 aa27.58■■■□□ 2.01
SSSCA1-207ENST00000533115 MRTO4Q9UKD2 239 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms