RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TNFRSF21O75509 655 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 OPN1LWP04000 364 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 ATP1B1P05026 303 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 C2P06681 752 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 FBN1P35555 2871 aaKnown RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 DSCR4P56555 118 aaPredicted RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 EFR3AQ14156 821 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 CAPRIN1Q14444 709 aaKnown RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 PODNL1Q6PEZ8 512 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 SLC44A2Q8IWA5 706 aaPredicted RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 METTL4Q8N3J2 472 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 DUSP19Q8WTR2 217 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 AKAP1Q92667 903 aaKnown RBP eCLIP11.73□□□□□ -0.53
COPB1-209ENST00000533096 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 CNRIP1Q96F85 164 aaPredicted RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 ELOVL6Q9H5J4 265 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 FOLH1BQ9HBA9 442 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 ZNF701Q9NV72 531 aaPredicted RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 MRPS18CQ9Y3D5 142 aaKnown RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 TNPO3Q9Y5L0 923 aaKnown RBP11.73□□□□□ -0.53
COPB1-209ENST00000533096 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 B4DXG7 233 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 TO15178 435 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 TSPAN2O60636 221 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 SEMA3DO95025 777 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 PLGP00747 810 aaPredicted RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 ALDOAP04075 364 aaKnown RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 CD8BP10966 210 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 TSPAN8P19075 237 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 RFX3P48380 749 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 ACAP2Q15057 778 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 LGSNQ5TDP6 509 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 FAM219BQ5XKK7 198 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 HEPHL1Q6MZM0 1159 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 COMMD6Q7Z4G1 85 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 MILR1Q7Z6M3 343 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 CENPLQ8N0S6 344 aaPredicted RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 CEP112Q8N8E3 955 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 PTGR2Q8N8N7 351 aaPredicted RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 FBF1Q8TES7 1133 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 GTPBP3Q969Y2 492 aaKnown RBP11.72□□□□□ -0.53
COPB1-209ENST00000533096 VPS11Q9H270 941 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 RNF122Q9H9V4 155 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 ADAM29Q9UKF5 820 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 UTS2RQ9UKP6 389 aa11.72□□□□□ -0.53
COPB1-209ENST00000533096 ARHGAP21Q5T5U3 1957 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 A0A096LPK6 155 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 OR2M5A3KFT3 312 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 HS3ST1O14792 307 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 CLOCKO15516 846 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 ZSCAN12O43309 604 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 AQP8O94778 261 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 PDYNP01213 254 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 IDUAP35475 653 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 PAFAH1B1P43034 410 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 PCYT1AP49585 367 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 GAS1P54826 345 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 CTBP2P56545 445 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 RPS3AP61247 264 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 OCRLQ01968 901 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 ERCC6LQ2NKX8 1250 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 KLC3Q6P597 504 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 CYS1Q717R9 158 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 FAM214BQ7L5A3 538 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 MARCH3Q86UD3 253 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 OR2M3Q8NG83 312 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 OR9A2Q8NGT5 310 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 RHEBL1Q8TAI7 183 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 UHMK1Q8TAS1 419 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 SELENOMQ8WWX9 145 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 EXOSC8Q96B26 276 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 SLC35A4Q96G79 324 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 NSUN5Q96P11 429 aaKnown RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 HBEGFQ99075 208 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 NTMT1Q9BV86 223 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 STMN4Q9H169 189 aaPredicted RBP11.71□□□□□ -0.53
COPB1-209ENST00000533096 SDHAF3Q9NRP4 125 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 FLRT3Q9NZU0 649 aa11.71□□□□□ -0.53
COPB1-209ENST00000533096 HIVEP2P31629 2446 aa11.7□□□□□ -0.54
COPB1-209ENST00000533096 PPP6CO00743 305 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms