RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-222	ENST00000532785	CARD9	Q9H257	536 aa		4.62	□□□□□ -1.67
LMO7-222	ENST00000532785	MID1IP1	Q9NPA3	183 aa		4.62	□□□□□ -1.67
LMO7-222	ENST00000532785	HMG20B	Q9P0W2	317 aa		4.62	□□□□□ -1.67
LMO7-222	ENST00000532785	TRMT6	Q9UJA5	497 aa	Known RBP	4.62	□□□□□ -1.67
LMO7-222	ENST00000532785	FZR1	Q9UM11	496 aa		4.62	□□□□□ -1.67
LMO7-222	ENST00000532785	KIN	O60870	393 aa	Known RBP	4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	PNP	P00491	289 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	PROS1	P07225	676 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	ABHD2	P08910	425 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	SRP54	P61011	504 aa	Known RBP	4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	LIPK	Q5VXJ0	399 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	PARG	Q86W56	976 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	TADA1	Q96BN2	335 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	SLC25A38	Q96DW6	304 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	IMMP1L	Q96LU5	166 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	TM2D1	Q9BX74	207 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	ABCG8	Q9H221	673 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	ZNF702P	Q9H963	129 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	FAM114A2	Q9NRY5	505 aa		4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.61	□□□□□ -1.67
LMO7-222	ENST00000532785	TRBV2	A0A0J9YWF9	115 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785		H3BMH7	237 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	STK17B	O94768	372 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	IGFBP1	P08833	259 aa	Predicted RBP	4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	SRY	Q05066	204 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	PARP6	Q2NL67	630 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	ZNF699	Q32M78	642 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	ZNF528	Q3MIS6	628 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	SCARA5	Q6ZMJ2	495 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	P4HA3	Q7Z4N8	544 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	GOLGA7	Q7Z5G4	137 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	AMZ2	Q86W34	360 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	SPC24	Q8NBT2	197 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	ZNF397	Q8NF99	534 aa	Predicted RBP	4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	TECTB	Q96PL2	329 aa		4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	NOL7	Q9UMY1	257 aa	Known RBP	4.6	□□□□□ -1.67
LMO7-222	ENST00000532785	TMEM89	A2RUT3	159 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	WWP2	O00308	870 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	GRIN2D	O15399	1336 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	IGLV1-47	P01700	117 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	NUMB	P49757	651 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	HFE	Q30201	348 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	ETFRF1	Q6IPR1	90 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	PNCK	Q6P2M8	343 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	C9orf40	Q8IXQ3	194 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	TMEM185A	Q8NFB2	350 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	NDUFAF3	Q9BU61	184 aa		4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	DUS2	Q9NX74	493 aa	Known RBP	4.59	□□□□□ -1.67
LMO7-222	ENST00000532785	FAM231B	A6NCW3	169 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	ZNF133	P52736	654 aa	Predicted RBP	4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	RIPPLY3	P57055	190 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	PKN2	Q16513	984 aa	Known RBP	4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	SBK1	Q52WX2	424 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	AGK	Q53H12	422 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	TGIF2LY	Q8IUE0	185 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	WDR36	Q8NI36	951 aa	Known RBP	4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	COQ7	Q99807	217 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	EHD1	Q9H4M9	534 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	MEPE	Q9NQ76	525 aa	Predicted RBP	4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	MBD2	Q9UBB5	411 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	BCAP29	Q9UHQ4	241 aa		4.58	□□□□□ -1.68
LMO7-222	ENST00000532785	USP6	P35125	1406 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785		A0A0U1RRA0	63 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	PDXK	O00764	312 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	OR7A17	O14581	309 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	PGK2	P07205	417 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	RPL32	P62910	135 aa	Known RBP	4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	HERVK_113	P63132	956 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	ERVK-8	P63133	956 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	UBXN1	Q04323	297 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	BCL2L1	Q07817	233 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	ACSF3	Q4G176	576 aa	Predicted RBP	4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	TMEM179B	Q7Z7N9	219 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	CNTN4	Q8IWV2	1026 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	MARC2	Q969Z3	335 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	CCDC51	Q96ER9	411 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	CABS1	Q96KC9	395 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	SPATA13	Q96N96	652 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	ERVK-6	Q9BXR3	956 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	FTHL17	Q9BXU8	183 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785		Q9H3A6	140 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	TEX264	Q9Y6I9	313 aa		4.57	□□□□□ -1.68
LMO7-222	ENST00000532785	ZMYM6	O95789	1325 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	EMC8	O43402	210 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	IGHV3-23	P01764	117 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	SLC35G4	P0C7Q5	338 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	CYP11B1	P15538	503 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	RPS6	P62753	249 aa	Known RBP	4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	CELF3	Q5SZQ8	465 aa	Known RBP	4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	SLX4IP	Q5VYV7	408 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	ADGRD2	Q7Z7M1	963 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	RNF175	Q8N4F7	328 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	CSNK1A1L	Q8N752	337 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	ELSPBP1	Q96BH3	223 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	ZNF799	Q96GE5	643 aa		4.56	□□□□□ -1.68
LMO7-222	ENST00000532785	VPS39	Q96JC1	886 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms