RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PNLIPRP2P54317 469 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 SRYQ05066 204 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 C2orf80Q0P641 193 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 FBXW10Q5XX13 1052 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 NPSR1Q6W5P4 371 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 SLC44A2Q8IWA5 706 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-204ENST00000530395 CHDHQ8NE62 594 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-204ENST00000530395 OR7G2Q8NG99 324 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 C11orf24Q96F05 449 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-204ENST00000530395 SFXN2Q96NB2 322 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 SFXN3Q9BWM7 321 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 ACBD3Q9H3P7 528 aa18.99■□□□□ 0.63
SMPD1-204ENST00000530395 DNASE1P24855 282 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 GRK2P25098 689 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 GFRA1P56159 465 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 DAZAP2Q15038 168 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-204ENST00000530395 ZYG11AQ6WRX3 759 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 CDC20BQ86Y33 519 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 MZB1Q8WU39 189 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 EFHD2Q96C19 240 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-204ENST00000530395 RHOXF2Q9BQY4 288 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 CCM2LQ9NUG4 571 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-204ENST00000530395 JKAMPQ9P055 326 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 FBXL2Q9UKC9 423 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 GRID1Q9ULK0 1009 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 MRPS18CQ9Y3D5 142 aaKnown RBP18.98■□□□□ 0.63
SMPD1-204ENST00000530395 MED12LQ86YW9 2145 aa18.98■□□□□ 0.63
SMPD1-204ENST00000530395 A0A087WV62 115 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 CLCA1A8K7I4 914 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 MYO1GB0I1T2 1018 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 NME6O75414 186 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-204ENST00000530395 RCBTB2O95199 551 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 FAM153BP0C7A2 387 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 EPXP11678 715 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 CHMP24386 653 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 NTSP30990 170 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 SLCO1A2P46721 670 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 NCBP2P52298 156 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMPD1-204ENST00000530395 FOXA1P55317 472 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 FAM153CQ494X1 144 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 CFAP157Q5JU67 520 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 OR4K17Q8NGC6 315 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 FAM76AQ8TAV0 307 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 WNT2BQ93097 391 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 UCN2Q96RP3 112 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 TXLNGYQ9BZA5 131 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 PPP4R1LQ9P1A2 415 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 EMCNQ9ULC0 261 aa18.97■□□□□ 0.63
SMPD1-204ENST00000530395 WBP11Q9Y2W2 641 aaKnown RBP18.97■□□□□ 0.63
SMPD1-204ENST00000530395 ZNF469Q96JG9 3925 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-204ENST00000530395 G3V2L1 256 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 UBFD1O14562 309 aaKnown RBP18.96■□□□□ 0.63
SMPD1-204ENST00000530395 JUNP05412 331 aaKnown RBP18.96■□□□□ 0.63
SMPD1-204ENST00000530395 DPP4P27487 766 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 MC3RP41968 323 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 CPA2P48052 419 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 LHX2P50458 406 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 EEF1A1P68104 462 aaKnown RBP18.96■□□□□ 0.63
SMPD1-204ENST00000530395 CCDC153Q494R4 210 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 SH2D4BQ5SQS7 431 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 EEF1A1P5Q5VTE0 462 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 OR5M10Q6IEU7 315 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 TMEM107Q6UX40 140 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 FRMD7Q6ZUT3 714 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 ADGRE4PQ86SQ3 457 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 RNF138Q8WVD3 245 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 RBM24Q9BX46 236 aaKnown RBP18.96■□□□□ 0.63
SMPD1-204ENST00000530395 CXXC4Q9H2H0 198 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 MYNNQ9NPC7 610 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 RRAGDQ9NQL2 400 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-204ENST00000530395 ABCA4P78363 2273 aa18.96■□□□□ 0.63
SMPD1-204ENST00000530395 PLOD2O00469 737 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 RSL1D1O76021 490 aaKnown RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 GOSR1O95249 250 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 EVI2BP34910 448 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 CCT5P48643 541 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 STARP49675 285 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 DSCR4P56555 118 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 FOXF2Q12947 444 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 GAB1Q13480 694 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 ZNHIT3Q15649 155 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 CYP27C1Q4G0S4 372 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 FAM71E1Q6IPT2 247 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 IKBIPQ70UQ0 350 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 TRIM46Q7Z4K8 759 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 GRAMD2AQ8IUY3 354 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 OR4N2Q8NGD1 307 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 INTS12Q96CB8 462 aaKnown RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 PIGMQ9H3S5 423 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 LIME1Q9H400 295 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 SDHAF3Q9NRP4 125 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 DDX18Q9NVP1 670 aaKnown RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 TAS2R7Q9NYW3 318 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 CLCF1Q9UBD9 225 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 MRTO4Q9UKD2 239 aaKnown RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 ABCG2Q9UNQ0 655 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 C19orf53Q9UNZ5 99 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 PLEKHA6Q9Y2H5 1048 aa18.95■□□□□ 0.62
SMPD1-204ENST00000530395 POLR3HQ9Y535 204 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-204ENST00000530395 VPS13CQ709C8 3753 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms