RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 FGD2Q7Z6J4 655 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 PACS2Q86VP3 889 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 FAM109AQ8N4B1 249 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 CDRT4Q8N9R6 151 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 RELTQ969Z4 430 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 TMCO6Q96DC7 493 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 JSRP1Q96MG2 331 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 RILPQ96NA2 401 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 CXorf36Q9H7Y0 433 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 METTL7AQ9H8H3 244 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 Q9N2J8 555 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 ERRFI1Q9UJM3 462 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 A0A1B0GUH1 482 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 PRAMEF25A6NGN4 478 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 RNASET2O00584 256 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 CFLARO15519 480 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNHIT1O43257 154 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 LRRTM2O43300 516 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 CDC40O60508 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC19A2O60779 497 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ICOSLGO75144 302 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 PDE9AO76083 593 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 NKX2-2O95096 273 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 IGHG3P01860 377 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ACP2P11117 423 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 KIR3DL1P43629 444 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 PRIM2P49643 509 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 NME5P56597 212 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 HBA1P69905 142 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 MRPS22P82650 360 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 DECR1Q16698 335 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 DPY19L1Q2PZI1 675 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 VPS26BQ4G0F5 336 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 EXOSC6Q5RKV6 272 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ANXA8L1Q5VT79 327 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 FNDC7Q5VTL7 733 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 C1QL3Q5VWW1 255 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 MFSD12Q6NUT3 480 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 RNF138Q8WVD3 245 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 C16orf58Q96GQ5 468 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 TEX37Q96LM6 180 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF597Q96LX8 424 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 OR52B2Q96RD2 323 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF703Q9H7S9 590 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 NEUROD4Q9HD90 331 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 QPCTLQ9NXS2 382 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 SNX8Q9Y5X2 465 aa11.6□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF407Q9C0G0 2248 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 TRGV8A0A0C4DH27 118 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 A0A1B0GVC2 190 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GXYLT2A0PJZ3 443 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 WIPF3A6NGB9 483 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 E9PBE3 544 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 IL33O95760 270 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 CELA3AP09093 270 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 ALOX5P09917 674 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 CYP4B1P13584 511 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 IDO1P14902 403 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 IL12AP29459 219 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 S100A3P33764 101 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PTGS2P35354 604 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 CA7P43166 264 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PSMD4P55036 377 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 C3AR1Q16581 482 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 DUSP5Q16690 384 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GSTA3Q16772 222 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PDCD4Q53EL6 469 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 SPANXN4Q5MJ08 99 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 TIGD3Q6B0B8 471 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 ARHGAP11AQ6P4F7 1023 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 TRILQ7L0X0 811 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC16A11Q8NCK7 471 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 OR56A1Q8NGH5 318 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 SFXN5Q8TD22 340 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GPR151Q8TDV0 419 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 SSC4DQ8WTU2 575 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PIK3R3Q92569 461 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC9A6Q92581 669 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GNRHR2Q96P88 292 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 YIPF4Q9BSR8 244 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 OSBPL11Q9BXB4 747 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 UBQLN3Q9H347 655 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GALNT9Q9HCQ5 603 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 ACKR4Q9NPB9 350 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GPATCH2Q9NW75 528 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 GIN1Q9NXP7 522 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms