RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 ITGB1BP2Q9UKP3 347 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 EDARQ9UNE0 448 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 TEP1Q99973 2627 aaKnown RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 HIVEP1P15822 2718 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 ANKRD17O75179 2603 aaKnown RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 A0A1W2PPM1 405 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 MBD3L4A6NDZ8 208 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 MBD3L3A6NE82 208 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 MBD3L5A6NJ08 208 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 MYO1GB0I1T2 1018 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 PLOD2O00469 737 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 TSPAN2O60636 221 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 CRCPO75575 148 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 PROCP04070 461 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 UROSP10746 265 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 CYP4B1P13584 511 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 BMP5P22003 454 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 CTSSP25774 331 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 IL12BP29460 328 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 OPRM1P35372 400 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 KIR2DL3P43628 341 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 NAGLUP54802 743 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 BTKQ06187 659 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 C2orf80Q0P641 193 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 AAGABQ6PD74 315 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 FRMD7Q6ZUT3 714 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 IKBIPQ70UQ0 350 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 TMEM200AQ86VY9 491 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 WDSUB1Q8N9V3 476 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 TNIP2Q8NFZ5 429 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 MBD3L2Q8NHZ7 208 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.93□□□□□ -0.34
CAPN1-212ENST00000527887 RNF138Q8WVD3 245 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 APOPT1Q96IL0 206 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 UCN2Q96RP3 112 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 ADOQ96SZ5 270 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 OR2B2Q9GZK3 357 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 EMCNQ9ULC0 261 aa12.93□□□□□ -0.34
CAPN1-212ENST00000527887 TTC36A6NLP5 189 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 NPIPB8E9PQR5 432 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 UBFD1O14562 309 aaKnown RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 PLIN3O60664 434 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 CD1EP15812 388 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 CHMP24386 653 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 SRD5A2P31213 254 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 FAM71E1Q6IPT2 247 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 LARP4Q71RC2 724 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 YRDCQ86U90 279 aaKnown RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 OR14L1PQ8NHC6 308 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 FAM222BQ8WU58 562 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 KAT2AQ92830 837 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 ZBTB9Q96C00 473 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 KCNA7Q96RP8 456 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 TM9SF2Q99805 663 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 TRMOQ9BU70 441 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 IQCGQ9H095 443 aaKnown RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 FOLH1BQ9HBA9 442 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 KCNK9Q9NPC2 374 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 MYNNQ9NPC7 610 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 SERHLQ9NQF3 203 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 OXSMQ9NWU1 459 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 TAS2R10Q9NYW0 307 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 MRTO4Q9UKD2 239 aaKnown RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 C19orf53Q9UNZ5 99 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 MAPRE3Q9UPY8 281 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 WIF1Q9Y5W5 379 aa12.92□□□□□ -0.34
CAPN1-212ENST00000527887 ANKHD1Q8IWZ3 2542 aaKnown RBP12.92□□□□□ -0.34
CAPN1-212ENST00000527887 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 SLC28A1O00337 649 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 COPEO14579 308 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 CTAG2O75638 210 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 GOSR1O95249 250 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 CPA3P15088 417 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 PRPH2P23942 346 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 NTSP30990 170 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 UQCRC1P31930 480 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 NCBP2P52298 156 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 ZNF136P52737 540 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 GYS2P54840 703 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 PSMD4P55036 377 aaKnown RBP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 FOXA1P55317 472 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 GFRA1P56159 465 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 SORDQ00796 357 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 BCL2A1Q16548 175 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 LIPMQ5VYY2 423 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 DESI1Q6ICB0 168 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms