RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PDCD4Q53EL6 469 aaKnown RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF628Q5EBL2 1059 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PLAG1Q6DJT9 500 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SPINK14Q6IE38 97 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SLC25A25Q6KCM7 469 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PAOXQ6QHF9 649 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ARMC10Q8N2F6 343 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 CIARTQ8N365 385 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 RPRMLQ8N4K4 120 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF615Q8N8J6 731 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ADCY4Q8NFM4 1077 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 OR9I1Q8NGQ6 314 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 FAM222BQ8WU58 562 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 METTL21AQ8WXB1 218 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 KLHL29Q96CT2 875 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SENP5Q96HI0 755 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 AMDHD1Q96NU7 426 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 BDH2Q9BUT1 245 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 MMP25Q9NPA2 562 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 CRIM1Q9NZV1 1036 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 A0A0G2JND7 137 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 A8MUI8 341 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 C17orf105B2RV13 164 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 UBDO15205 165 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 WIPF1O43516 503 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 DSCAMO60469 2012 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF354AO60765 605 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-204ENST00000526430 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-204ENST00000526430 GOSR1O95249 250 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 CBX7O95931 251 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 CD53P19397 219 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 EFNA1P20827 205 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-204ENST00000526430 NME5P56597 212 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 ACTN3Q08043 901 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-204ENST00000526430 TERF2Q15554 542 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 EMC4Q5J8M3 183 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 NXNQ6DKJ4 435 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 OR4F3Q6IEY1 312 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 ARHGAP11AQ6P4F7 1023 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 LGI4Q8N135 537 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 B3GNT7Q8NFL0 401 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 CDC26Q8NHZ8 85 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 PSMA8Q8TAA3 256 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 M1APQ8TC57 530 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF675Q8TD23 568 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 TESCQ96BS2 214 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 LPAR4Q99677 370 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 PLEKHF2Q9H8W4 249 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 WDR41Q9HAD4 459 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 SIRT3Q9NTG7 399 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-204ENST00000526430 ANKRD10Q9NXR5 420 aa10.03□□□□□ -0.8
NEDD8-204ENST00000526430 TFECO14948 347 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SNX3O60493 162 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SLC25A12O75746 678 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 PSMG1O95456 288 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 IFNA16P05015 189 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 IDO1P14902 403 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SSTR4P31391 388 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SLC37A1P57057 533 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 MRPS35P82673 323 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ZNF267Q14586 743 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 MLC1Q15049 377 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 GSTA3Q16772 222 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SPANXN4Q5MJ08 99 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 Q5PR19 223 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 METTL21CQ5VZV1 264 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 FCRLBQ6BAA4 426 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 PRSS57Q6UWY2 283 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 C16orf47Q6ZP98 133 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 CXorf67Q86X51 503 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 MORN4Q8NDC4 146 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 OR7G2Q8NG99 324 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 OR8J2Q8NGG1 315 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 OR9A2Q8NGT5 310 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 KAT2AQ92830 837 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 RIT1Q92963 219 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 NCLNQ969V3 563 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 PPCDCQ96CD2 204 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ELP4Q96EB1 424 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 DGAT2Q96PD7 388 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SECISBP2Q96T21 854 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ELAC2Q9BQ52 826 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 DPY30Q9C005 99 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 RABEP2Q9H5N1 569 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SERHLQ9NQF3 203 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ZIM2Q9NZV7 527 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 SH3BP4Q9P0V3 963 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms