RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 CARTPTQ16568 116 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ASPRV1Q53RT3 343 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 LRRC8BQ6P9F7 803 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 UNQ6126/PRO20091Q6UXV3 157 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ANO5Q75V66 913 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 PIWIL4Q7Z3Z4 852 aaKnown RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 KIAA1328Q86T90 577 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 LUZP2Q86TE4 346 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 RBM23Q86U06 439 aaKnown RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 FAM131BQ86XD5 332 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 FAM114A1Q8IWE2 563 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 KIAA0895Q8NCT3 520 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CDC26Q8NHZ8 85 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CHPT1Q8WUD6 406 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CIDECQ96AQ7 238 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 ELMO2Q96JJ3 720 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 RASL10BQ96S79 203 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 MYADMQ96S97 322 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 MEIS3Q99687 375 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ACBD6Q9BR61 282 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 LRRC1Q9BTT6 524 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CDH20Q9HBT6 801 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 UXTQ9UBK9 157 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 RNF14Q9UBS8 474 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 SLC22A14Q9Y267 594 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 IFT52Q9Y366 437 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ZHX2Q9Y6X8 837 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 A0A087X0K7 114 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 A0A1W2PS18 150 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 PCP4L1A6NKN8 68 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 DFNA5O60443 496 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SDC3O75056 442 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 OR5F1O95221 314 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 LUC7L3O95232 432 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 BAG4O95429 457 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 C9P02748 559 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ALPIP09923 528 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 PNMTP11086 282 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ACP2P11117 423 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 EPCAMP16422 314 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 CAPN2P17655 700 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 MX1P20591 662 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 MARCKSP29966 332 aaPredicted RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 ETV5P41161 510 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 RPS5P46782 204 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 ACADVLP49748 655 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 PPT1P50897 306 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 FUT6P51993 359 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 DSTNP60981 165 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 YWHAGP61981 247 aaKnown RBP eCLIP4.29□□□□□ -1.72
CD44-220ENST00000525688 RPS15P62841 145 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 DLK1P80370 383 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 ANGPT1Q15389 498 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 TEX44Q53QW1 395 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 IRAK1BP1Q5VVH5 260 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 TTC23Q5W5X9 447 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 FAM159AQ6UWV7 190 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SYT10Q6XYQ8 523 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ZNF852Q6ZMS4 543 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 TPGS1Q6ZTW0 290 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 STXBP4Q6ZWJ1 553 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SLC24A5Q71RS6 500 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SLC16A9Q7RTY1 509 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ARHGAP24Q8N264 748 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 OR4K14Q8NGD5 310 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 NDNFQ8TB73 568 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 TRMT10AQ8TBZ6 339 aaKnown RBP4.29□□□□□ -1.72
CD44-220ENST00000525688 CCDC107Q8WV48 283 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 NPAS2Q99743 824 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 RTP3Q9BQQ7 232 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 OR52A5Q9H2C5 316 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 CUEDC2Q9H467 287 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 FBXO44Q9H4M3 255 aa4.29□□□□□ -1.72
CD44-220ENST00000525688 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms