RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 DOHHQ9BU89 302 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 AIG1Q9NVV5 245 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 QPCTLQ9NXS2 382 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 BOKQ9UMX3 212 aaPredicted RBP11.86□□□□□ -0.51
CTSB-209ENST00000525315 USH1CQ9Y6N9 552 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 LRRK2Q5S007 2527 aa11.86□□□□□ -0.51
CTSB-209ENST00000525315 PHF3Q92576 2039 aaKnown RBP11.86□□□□□ -0.51
CTSB-209ENST00000525315 A0A1B0GTH9 108 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 PRSS51A0A1B0GVH4 220 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 RNASET2O00584 256 aaKnown RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 LRRTM2O43300 516 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 SLC19A2O60779 497 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 PDE9AO76083 593 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 AGFG2O95081 481 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 IL33O95760 270 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 C6orf47O95873 294 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 GABRA3P34903 492 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 CA7P43166 264 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 MAGEA5P43359 124 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 CCT3P49368 545 aaKnown RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 UFM1P61960 85 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 HBA1P69905 142 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 MRPS22P82650 360 aaKnown RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 PRR5P85299 388 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 HSF1Q00613 529 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 DECR1Q16698 335 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 DPY19L1Q2PZI1 675 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 VPS26BQ4G0F5 336 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 OR4F3Q6IEY1 312 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 CDRT4Q8N9R6 151 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 TEX37Q96LM6 180 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 OR52B2Q96RD2 323 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 CXorf36Q9H7Y0 433 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 METTL7AQ9H8H3 244 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 Q9N2J8 555 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 ACKR4Q9NPB9 350 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 GIN1Q9NXP7 522 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 OR10H1Q9Y4A9 318 aa11.85□□□□□ -0.51
CTSB-209ENST00000525315 NCOA6Q14686 2063 aaPredicted RBP11.85□□□□□ -0.51
CTSB-209ENST00000525315 ZNHIT1O43257 154 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 SUSD5O60279 629 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 SOX30O94993 753 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 LDLRP01130 860 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 CELA3AP09093 270 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ACP2P11117 423 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 CYP4B1P13584 511 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 IL12AP29459 219 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 IL12BP29460 328 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 PTGS2P35354 604 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 KRT20P35900 424 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 KIR3DL1P43629 444 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 GAS1P54826 345 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 GSTA3Q16772 222 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ANXA8L1Q5VT79 327 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 TIGD3Q6B0B8 471 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ARHGAP11AQ6P4F7 1023 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 TRILQ7L0X0 811 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 SLC16A11Q8NCK7 471 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 VPS37AQ8NEZ2 397 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 SSC4DQ8WTU2 575 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 MOAP1Q96BY2 351 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 EFHD2Q96C19 240 aaPredicted RBP11.84□□□□□ -0.51
CTSB-209ENST00000525315 C16orf58Q96GQ5 468 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ZNF597Q96LX8 424 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 MS4A4EQ96PG1 132 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 OSBPL11Q9BXB4 747 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 UBQLN3Q9H347 655 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ZNF703Q9H7S9 590 aaPredicted RBP11.84□□□□□ -0.51
CTSB-209ENST00000525315 NEUROD4Q9HD90 331 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ZCCHC3Q9NUD5 404 aaKnown RBP11.84□□□□□ -0.51
CTSB-209ENST00000525315 SNX8Q9Y5X2 465 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ARHGAP21Q5T5U3 1957 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
CTSB-209ENST00000525315 UQCRHLA0A096LP55 91 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 GXYLT2A0PJZ3 443 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 E9PBE3 544 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 ADAM10O14672 748 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 SNPHO15079 494 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 UBDO15205 165 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 CFLARO15519 480 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 FADS1O60427 444 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTSB-209ENST00000525315 HCN1O60741 890 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 DIAPH2O60879 1101 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 IGKV1D-16P01601 117 aa11.83□□□□□ -0.52
CTSB-209ENST00000525315 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms