RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 UBQLN3Q9H347 655 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 SERHLQ9NQF3 203 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 RNF6Q9Y252 685 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 FAM215AQ9Y5M1 114 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 DNAJC13O75165 2243 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 FAM90A27PA6NNH2 459 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 C17orf51A8MQB3 221 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 SNPHO15079 494 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 BIRC5O15392 142 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 HNRNPRO43390 633 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 TBX19O60806 448 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLITRK5O94991 958 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZWINTO95229 277 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 PSMG1O95456 288 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 HPNP05981 417 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 MYZAPP0CAP1 466 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 GLI4P10075 376 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 CYP4B1P13584 511 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 MAPK1P28482 360 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 GABRA3P34903 492 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 ASMTP46597 345 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC1A6P48664 564 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 PNLIPRP2P54317 469 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 EFR3AQ14156 821 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 PTGR1Q14914 329 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMEM81Q6P7N7 255 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 SZRD1Q7Z422 152 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 WDSUB1Q8N9V3 476 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 FAM83FQ8NEG4 500 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZFP28Q8NHY6 868 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 FBXO30Q8TB52 745 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 TTYH2Q9BSA4 534 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 CHST11Q9NPF2 352 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 FLRT3Q9NZU0 649 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 CBLCQ9ULV8 474 aa11.72□□□□□ -0.53
TRAPPC4-205ENST00000525079 PCNX1Q96RV3 2341 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 GXYLT2A0PJZ3 443 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 NKX2-6A6NCS4 301 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 SCAMP2O15127 329 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 SCO2O43819 266 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 WDR1O75083 606 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ERLIN1O75477 346 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 LAMP1P11279 417 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 PRPS2P11908 318 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 PRF1P14222 555 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 BMP7P18075 431 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 HPCAL1P37235 193 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 FRKP42685 505 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 KIR3DL1P43629 444 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 WNT3P56703 355 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 CRYZQ08257 329 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 STX3Q13277 289 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 SNTA1Q13424 505 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 DECR1Q16698 335 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 CYP27C1Q4G0S4 372 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 HHATQ5VTY9 493 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 B3GNT6Q6ZMB0 384 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACAD11Q709F0 780 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 R3HCC1LQ7Z5L2 792 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 CROCCP2Q86T23 111 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ULK2Q8IYT8 1036 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 KRTCAP2Q8N6L1 136 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 NUP43Q8NFH3 380 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 MGARPQ8TDB4 240 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 PIK3R3Q92569 461 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 MTERF3Q96E29 417 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZBED6CLQ96FA7 236 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 OTUB1Q96FW1 271 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 TIMP4Q99727 224 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 LMF2Q9BU23 707 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 Q9N2J8 555 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ATP6V1HQ9UI12 483 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 FBXL2Q9UKC9 423 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 CAMK2AQ9UQM7 478 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
TRAPPC4-205ENST00000525079 PHF3Q92576 2039 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 A0A0G2JNJ9 132 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 A0A1W2PRB8 838 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 KDM4EB2RXH2 506 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 CBR3O75828 277 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 G6PDP11413 515 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 COX6B1P14854 86 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 GRK2P25098 689 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 CHRNB4P30926 498 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 ADH7P40394 386 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 DCST1Q5T197 706 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 CPTPQ5TA50 214 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 VASNQ6EMK4 673 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 GALNT10Q86SR1 603 aa11.7□□□□□ -0.54
TRAPPC4-205ENST00000525079 PLCZ1Q86YW0 608 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms