RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 IL4I1Q96RQ9 567 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 CCM2Q9BSQ5 444 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 DUSP16Q9BY84 665 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 TM6SF2Q9BZW4 377 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 CXXC4Q9H2H0 198 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SMYD3Q9H7B4 428 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 TMEM165Q9HC07 324 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 MYOZ2Q9NPC6 264 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 ZNF302Q9NR11 478 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 THSD1Q9NS62 852 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 STARD5Q9NSY2 213 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SIX4Q9UIU6 781 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 IKZF2Q9UKS7 526 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 PRPF19Q9UMS4 504 aaKnown RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 STARD10Q9Y365 291 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 FKBP7Q9Y680 259 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 PNPLA6Q8IY17 1366 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 ATP10AO60312 1499 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 ZCCHC6Q5VYS8 1495 aaKnown RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 AK9Q5TCS8 1911 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 MROH7-TTC4A0A0A0MT08 1334 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 SNED1Q8TER0 1413 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 LRP5LA4QPB2 252 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 NPEPPSL1A6NEC2 478 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 C5orf60A6NFR6 353 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 FBLL1A6NHQ2 334 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 OR7A17O14581 309 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 BUD23O43709 281 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 JTBO76095 146 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 NXPH2O95156 264 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 LCA5LO95447 670 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 IGF1P05019 195 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 HSMCR30P0CW71 290 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 CHRNB1P11230 501 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 IL32P24001 234 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 MMP11P24347 488 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 STOMP27105 288 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 MAT2AP31153 395 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 HOXA6P31267 233 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 YWHABP31946 246 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 ETV5P41161 510 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 CRATP43155 626 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 UQCRFS1P47985 274 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 ACLYP53396 1101 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 OSTNP61366 133 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 OGDHQ02218 1023 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 MOGAT2Q3SYC2 334 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 ZNF385BQ569K4 471 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 NT5DC1Q5TFE4 455 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 C19orf35Q6ZS72 473 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 BHLHA15Q7RTS1 189 aaPredicted RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 MRGPREQ86SM8 312 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 CACUL1Q86Y37 369 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 C1QL4Q86Z23 238 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 Q8N9G6 341 aaPredicted RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 GATSQ8NAP1 163 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 RELL2Q8NC24 303 aaPredicted RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 TMEM104Q8NE00 496 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 GPR148Q8TDV2 347 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 PIGTQ969N2 578 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 SCRN2Q96FV2 425 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 PCED1BQ96HM7 432 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 SH2D3AQ9BRG2 576 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 TTYH2Q9BSA4 534 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 URM1Q9BTM9 101 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 UPF3BQ9BZI7 483 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 NDEL1Q9GZM8 345 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 HIPK2Q9H2X6 1198 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 RANBP3Q9H6Z4 567 aaPredicted RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 GPN2Q9H9Y4 310 aaPredicted RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 GDF3Q9NR23 364 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 LYARQ9NX58 379 aaKnown RBP3.6□□□□□ -1.83
SKP1-209ENST00000522552 GPR83Q9NYM4 423 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 HMGXB4Q9UGU5 601 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 PHF11Q9UIL8 331 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 POMT2Q9UKY4 750 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 SLC6A5Q9Y345 797 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 PCDHAC2Q9Y5I4 1007 aa3.6□□□□□ -1.83
SKP1-209ENST00000522552 A0A0G2JK05 382 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 GSTTP1A0A1W2PQM5 241 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 SMIM22K7EJ46 135 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 RFXAPO00287 272 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 ITM2AO43736 263 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 N4BP1O75113 896 aaKnown RBP3.59□□□□□ -1.83
SKP1-209ENST00000522552 ADORA3P0DMS8 318 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 ANXA3P12429 323 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 NAGAP17050 411 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 GTF2E2P29084 291 aaKnown RBP3.59□□□□□ -1.83
SKP1-209ENST00000522552 RPL3P39023 403 aaKnown RBP3.59□□□□□ -1.83
SKP1-209ENST00000522552 TMPOP42166 694 aaKnown RBP3.59□□□□□ -1.83
SKP1-209ENST00000522552 SLC1A4P43007 532 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 EFNB2P52799 333 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 ATP12AP54707 1039 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 ATP5J2P56134 94 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 B3GALT5-AS1P59052 145 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 RPS18P62269 152 aaKnown RBP3.59□□□□□ -1.83
SKP1-209ENST00000522552 ZP4Q12836 540 aa3.59□□□□□ -1.83
SKP1-209ENST00000522552 FASTKD3Q14CZ7 662 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms