RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 WDR53Q7Z5U6 358 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 WDSUB1Q8N9V3 476 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 CA5BP1Q8WTZ4 195 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 MTERF3Q96E29 417 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 TTYH2Q9BSA4 534 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 C20orf27Q9GZN8 174 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 OR10H1Q9Y4A9 318 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 C15orf38-AP3S2A0A0A6YYH1 394 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZWINTO95229 277 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 GLI4P10075 376 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 MAPK1P28482 360 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 IL12BP29460 328 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 GPC1P35052 558 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 MANFP55145 182 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ABCE1P61221 599 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 TOMM20Q15388 145 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 CYP27C1Q4G0S4 372 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 C1orf185Q5T7R7 199 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 IL23RQ5VWK5 629 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 B3GNT6Q6ZMB0 384 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 R3HCC1LQ7Z5L2 792 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 CCDC71Q8IV32 467 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZNF781Q8N8C0 355 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 RNF138Q8WVD3 245 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ASB5Q8WWX0 329 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZBED6CLQ96FA7 236 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 TIMP4Q99727 224 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 LMF2Q9BU23 707 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 C1orf50Q9BV19 199 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 SERHLQ9NQF3 203 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ACSS1Q9NUB1 689 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 ATP6V1HQ9UI12 483 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 MAPRE3Q9UPY8 281 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 SLC6A5Q9Y345 797 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 CRYBG3Q68DQ2 2970 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 CELSR2Q9HCU4 2923 aa16.31■□□□□ 0.2
TRAPPC9-211ENST00000521700 CBR3O75828 277 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 HOXD4P09016 255 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 MYZAPP0CAP1 466 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 PRPS2P11908 318 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 CYP4B1P13584 511 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 EFNA1P20827 205 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 KIR3DL1P43629 444 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 CRYZQ08257 329 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 PTGR1Q14914 329 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 WIPI1Q5MNZ9 446 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 VASNQ6EMK4 673 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 YRDCQ86U90 279 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 FNDC5Q8NAU1 212 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZFP28Q8NHY6 868 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 NUDT8Q8WV74 236 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 TUBGCP3Q96CW5 907 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 NTMQ9P121 344 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 CBLCQ9ULV8 474 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 RAP2CQ9Y3L5 183 aa16.3■□□□□ 0.2
TRAPPC9-211ENST00000521700 ITPR2Q14571 2701 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 SCAMP2O15127 329 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 PRF1P14222 555 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 GABRA1P14867 456 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 BMP7P18075 431 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 BGNP21810 368 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 GRK2P25098 689 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 CHRNB4P30926 498 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 GABRA3P34903 492 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 HPCAL1P37235 193 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 MAP3K8P41279 467 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 SLC1A6P48664 564 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 PRKAG1P54619 331 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 GAS1P54826 345 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 MRPS22P82650 360 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 NHSL2Q5HYW2 709 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 PLCZ1Q86YW0 608 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 FAM83FQ8NEG4 500 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 NUP43Q8NFH3 380 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 OR7A2PQ8NGA2 310 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 OR10Q1Q8NGQ4 319 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 HOXB13Q92826 284 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 SORT1Q99523 831 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 UCK2Q9BZX2 261 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 Q9N2J8 555 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 EQTNQ9NQ60 294 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 FLRT3Q9NZU0 649 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 WIF1Q9Y5W5 379 aa16.29■□□□□ 0.2
TRAPPC9-211ENST00000521700 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 GXYLT2A0PJZ3 443 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 TTC36A6NLP5 189 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 B4DXG7 233 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 ERLIN1O75477 346 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 SNRPB2P08579 225 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 LAMP1P11279 417 aa16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 RPL3P39023 403 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-211ENST00000521700 ADH7P40394 386 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms