RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TACO1Q9BSH4 297 aaKnown RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 LRRC1Q9BTT6 524 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 DPH5Q9H2P9 285 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 DSN1Q9H410 356 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 LAMP3Q9UQV4 416 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 HRNRQ86YZ3 2850 aaPredicted RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 LRRC14BA6NHZ5 514 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 FAM159BA6NKW6 160 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 RNF223E7ERA6 249 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 TO15178 435 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 ZIC3O60481 467 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 PCSK2P16519 638 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 IDUAP35475 653 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 RPS4XP62701 263 aaKnown RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 MRPS35P82673 323 aaKnown RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 STX5Q13190 355 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 UAP1Q16222 522 aaPredicted RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 SH2D4BQ5SQS7 431 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 HEPHL1Q6MZM0 1159 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 CYS1Q717R9 158 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 MILR1Q7Z6M3 343 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 MAPK1IP1LQ8NDC0 245 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 FNDC9Q8TBE3 224 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 EFHD2Q96C19 240 aaPredicted RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 PLPPR2Q96GM1 343 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 HEY2Q9UBP5 337 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 UTS2RQ9UKP6 389 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 GPR55Q9Y2T6 319 aaPredicted RBP10.37□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF175Q9Y473 711 aa10.37□□□□□ -0.75
MRPS28-206ENST00000520946 HS3ST1O14792 307 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SMIM24O75264 130 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SIX3O95343 332 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 CBX7O95931 251 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 FESP07332 822 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 MTHFD2P13995 350 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 TYK2P29597 1187 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 EMDP50402 254 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 PNLIPRP2P54317 469 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 CLDN15P56746 228 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 IRF9Q00978 393 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 GANABQ14697 944 aaKnown RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 LTB4RQ15722 352 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 ETFDHQ16134 617 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 MROH9Q5TGP6 573 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 FAM180BQ6P0A1 224 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 METTL2BQ6P1Q9 378 aaKnown RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SH2D5Q6ZV89 423 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 FAM214BQ7L5A3 538 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 COMMD6Q7Z4G1 85 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SLC44A2Q8IWA5 706 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SAMD14Q8IZD0 417 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 METTL4Q8N3J2 472 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 PTGR2Q8N8N7 351 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 FBF1Q8TES7 1133 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SELENOMQ8WWX9 145 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 AKAP1Q92667 903 aaKnown RBP eCLIP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 KAT2AQ92830 837 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 PHF21BQ96EK2 531 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SLC35A4Q96G79 324 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 VPS11Q9H270 941 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF701Q9NV72 531 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 TAS2R9Q9NYW1 312 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 MED11Q9P086 117 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF639Q9UID6 485 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 MRTO4Q9UKD2 239 aaKnown RBP10.36□□□□□ -0.75
MRPS28-206ENST00000520946 NFU1Q9UMS0 254 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 SNX6Q9UNH7 406 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF337Q9Y3M9 751 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 TLN2Q9Y4G6 2542 aa10.36□□□□□ -0.75
MRPS28-206ENST00000520946 CHD3Q12873 2000 aaKnown RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 A0A096LPK6 155 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 GNG14A0A1W2PPG7 69 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 CLOCKO15516 846 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 NDUFB5O43674 189 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 TLX2O43763 284 aaPredicted RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 KLHL2O95198 593 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 SYNGR4O95473 234 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 C2P06681 752 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 CCKARP32238 428 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 EVI2BP34910 448 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 EIF1AXP47813 144 aaKnown RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 RFX3P48380 749 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 CORO7P57737 925 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 MGAT2Q10469 447 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF155Q12901 538 aaPredicted RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 NAB1Q13506 487 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 CHRFAM7AQ494W8 412 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 LGSNQ5TDP6 509 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 BEND4Q6ZU67 534 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 OR52B6Q8NGF0 335 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 OR5M1Q8NGP8 315 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 UHMK1Q8TAS1 419 aaKnown RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 EXOSC8Q96B26 276 aaKnown RBP10.35□□□□□ -0.75
MRPS28-206ENST00000520946 TM4SF18Q96CE8 201 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 MTBPQ96DY7 904 aa10.35□□□□□ -0.75
MRPS28-206ENST00000520946 BTBD9Q96Q07 612 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms