RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CWC27Q6UX04 472 aaKnown RBP2.59□□□□□ -1.99
SKP1-207ENST00000520417 FRA10AC1Q70Z53 315 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 FIBINQ8TAL6 211 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 C11orf24Q96F05 449 aaPredicted RBP2.59□□□□□ -1.99
SKP1-207ENST00000520417 TBX15Q96SF7 602 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 CACNG6Q9BXT2 260 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 FUT8Q9BYC5 575 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 NLNQ9BYT8 704 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 OR51J1Q9H342 316 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 GLIPR2Q9H4G4 154 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 AKIRIN1Q9H9L7 192 aaPredicted RBP2.59□□□□□ -1.99
SKP1-207ENST00000520417 NARFQ9UHQ1 456 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 TRMT6Q9UJA5 497 aaKnown RBP2.59□□□□□ -1.99
SKP1-207ENST00000520417 TRBV7-9A0A0J9YWB2 115 aa2.58□□□□□ -2
SKP1-207ENST00000520417 A0A1B0GUA9 196 aa2.58□□□□□ -2
SKP1-207ENST00000520417 A0A1W2PQ67 120 aa2.58□□□□□ -2
SKP1-207ENST00000520417 TMEM110-MUSTN1A8MSY1 372 aa2.58□□□□□ -2
SKP1-207ENST00000520417 CHEK1O14757 476 aa2.58□□□□□ -2
SKP1-207ENST00000520417 TBL1XO60907 577 aa2.58□□□□□ -2
SKP1-207ENST00000520417 LRP3O75074 770 aa2.58□□□□□ -2
SKP1-207ENST00000520417 HIST1H2AGP0C0S8 130 aaPredicted RBP2.58□□□□□ -2
SKP1-207ENST00000520417 VCLP18206 1134 aa2.58□□□□□ -2
SKP1-207ENST00000520417 STX1BP61266 288 aa2.58□□□□□ -2
SKP1-207ENST00000520417 UBXN1Q04323 297 aa2.58□□□□□ -2
SKP1-207ENST00000520417 ZNF674Q2M3X9 581 aa2.58□□□□□ -2
SKP1-207ENST00000520417 GLRA4Q5JXX5 417 aa2.58□□□□□ -2
SKP1-207ENST00000520417 TMEM110Q86TL2 294 aa2.58□□□□□ -2
SKP1-207ENST00000520417 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.58□□□□□ -2
SKP1-207ENST00000520417 ZNF786Q8N393 782 aa2.58□□□□□ -2
SKP1-207ENST00000520417 ZNF561Q8N587 486 aa2.58□□□□□ -2
SKP1-207ENST00000520417 CSNK1A1LQ8N752 337 aa2.58□□□□□ -2
SKP1-207ENST00000520417 ARIH2OSQ8N7S6 290 aa2.58□□□□□ -2
SKP1-207ENST00000520417 ZNF540Q8NDQ6 660 aa2.58□□□□□ -2
SKP1-207ENST00000520417 HIST1H2ACQ93077 130 aa2.58□□□□□ -2
SKP1-207ENST00000520417 NEIL2Q969S2 332 aa2.58□□□□□ -2
SKP1-207ENST00000520417 RTBDNQ9BSG5 229 aaPredicted RBP2.58□□□□□ -2
SKP1-207ENST00000520417 CNIH4Q9P003 139 aa2.58□□□□□ -2
SKP1-207ENST00000520417 TRPC4Q9UBN4 977 aa2.58□□□□□ -2
SKP1-207ENST00000520417 LIPT1Q9Y234 373 aa2.58□□□□□ -2
SKP1-207ENST00000520417 FOXA2Q9Y261 457 aaPredicted RBP2.58□□□□□ -2
SKP1-207ENST00000520417 RPH3AQ9Y2J0 694 aaPredicted RBP2.58□□□□□ -2
SKP1-207ENST00000520417 ZNF175Q9Y473 711 aa2.58□□□□□ -2
SKP1-207ENST00000520417 IGKV2-28A0A075B6P5 120 aa2.57□□□□□ -2
SKP1-207ENST00000520417 SMIM30A4D0T7 59 aa2.57□□□□□ -2
SKP1-207ENST00000520417 LRRD1A4D1F6 860 aa2.57□□□□□ -2
SKP1-207ENST00000520417 LRIT2A6NDA9 550 aa2.57□□□□□ -2
SKP1-207ENST00000520417 DHRS7CA6NNS2 312 aa2.57□□□□□ -2
SKP1-207ENST00000520417 IGKV2D-28P01615 120 aa2.57□□□□□ -2
SKP1-207ENST00000520417 KRTAP10-10P60014 251 aa2.57□□□□□ -2
SKP1-207ENST00000520417 KRT83P78385 493 aa2.57□□□□□ -2
SKP1-207ENST00000520417 DPYSL3Q14195 570 aa2.57□□□□□ -2
SKP1-207ENST00000520417 ELAVL3Q14576 367 aaKnown RBP2.57□□□□□ -2
SKP1-207ENST00000520417 RAB35Q15286 201 aa2.57□□□□□ -2
SKP1-207ENST00000520417 ZNF630Q2M218 657 aaPredicted RBP2.57□□□□□ -2
SKP1-207ENST00000520417 OR2B11Q5JQS5 317 aa2.57□□□□□ -2
SKP1-207ENST00000520417 ZNF691Q5VV52 312 aa2.57□□□□□ -2
SKP1-207ENST00000520417 NKAIN2Q5VXU1 208 aa2.57□□□□□ -2
SKP1-207ENST00000520417 CYB5R2Q6BCY4 276 aa2.57□□□□□ -2
SKP1-207ENST00000520417 PARGQ86W56 976 aa2.57□□□□□ -2
SKP1-207ENST00000520417 CENPSQ8N2Z9 138 aa2.57□□□□□ -2
SKP1-207ENST00000520417 ALLCQ8N6M5 410 aa2.57□□□□□ -2
SKP1-207ENST00000520417 C10orf53Q8N6V4 93 aa2.57□□□□□ -2
SKP1-207ENST00000520417 NAT8LQ8N9F0 302 aa2.57□□□□□ -2
SKP1-207ENST00000520417 MLKLQ8NB16 471 aa2.57□□□□□ -2
SKP1-207ENST00000520417 ZNF397Q8NF99 534 aaPredicted RBP2.57□□□□□ -2
SKP1-207ENST00000520417 ADAMTS16Q8TE57 1224 aa2.57□□□□□ -2
SKP1-207ENST00000520417 VPS39Q96JC1 886 aa2.57□□□□□ -2
SKP1-207ENST00000520417 NOL4LQ96MY1 436 aaPredicted RBP2.57□□□□□ -2
SKP1-207ENST00000520417 OSBPL8Q9BZF1 889 aa2.57□□□□□ -2
SKP1-207ENST00000520417 SLC5A7Q9GZV3 580 aa2.57□□□□□ -2
SKP1-207ENST00000520417 C2orf40Q9H1Z8 148 aa2.57□□□□□ -2
SKP1-207ENST00000520417 MEPEQ9NQ76 525 aaPredicted RBP2.57□□□□□ -2
SKP1-207ENST00000520417 LHX3Q9UBR4 397 aa2.57□□□□□ -2
SKP1-207ENST00000520417 KLHDC2Q9Y2U9 406 aa2.57□□□□□ -2
SKP1-207ENST00000520417 MRPS2Q9Y399 296 aaKnown RBP2.57□□□□□ -2
SKP1-207ENST00000520417 USP6P35125 1406 aa2.57□□□□□ -2
SKP1-207ENST00000520417 USP27XA6NNY8 438 aa2.56□□□□□ -2
SKP1-207ENST00000520417 E9PLD3 99 aa2.56□□□□□ -2
SKP1-207ENST00000520417 PDLIM1O00151 329 aa2.56□□□□□ -2
SKP1-207ENST00000520417 SLC28A1O00337 649 aa2.56□□□□□ -2
SKP1-207ENST00000520417 TOXO94900 526 aa2.56□□□□□ -2
SKP1-207ENST00000520417 SERPINF2P08697 491 aa2.56□□□□□ -2
SKP1-207ENST00000520417 UROSP10746 265 aa2.56□□□□□ -2
SKP1-207ENST00000520417 NPY2RP49146 381 aa2.56□□□□□ -2
SKP1-207ENST00000520417 NME5P56597 212 aa2.56□□□□□ -2
SKP1-207ENST00000520417 DPYSQ14117 519 aa2.56□□□□□ -2
SKP1-207ENST00000520417 BTG3Q14201 252 aaPredicted RBP2.56□□□□□ -2
SKP1-207ENST00000520417 SHHQ15465 462 aa2.56□□□□□ -2
SKP1-207ENST00000520417 ZKSCAN8Q15776 578 aaPredicted RBP2.56□□□□□ -2
SKP1-207ENST00000520417 FUT11Q495W5 492 aa2.56□□□□□ -2
SKP1-207ENST00000520417 ZNF57Q68EA5 555 aaPredicted RBP2.56□□□□□ -2
SKP1-207ENST00000520417 IYDQ6PHW0 289 aa2.56□□□□□ -2
SKP1-207ENST00000520417 IL34Q6ZMJ4 242 aa2.56□□□□□ -2
SKP1-207ENST00000520417 SLC22A16Q86VW1 577 aa2.56□□□□□ -2
SKP1-207ENST00000520417 FBXO30Q8TB52 745 aa2.56□□□□□ -2
SKP1-207ENST00000520417 TMEM37Q8WXS4 190 aa2.56□□□□□ -2
SKP1-207ENST00000520417 DLX4Q92988 240 aaPredicted RBP2.56□□□□□ -2
SKP1-207ENST00000520417 GPR137Q96N19 417 aa2.56□□□□□ -2
SKP1-207ENST00000520417 DEFB118Q96PH6 123 aa2.56□□□□□ -2
SKP1-207ENST00000520417 SMIM14Q96QK8 99 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms