RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SPDEFO95238 335 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 CLDN9O95484 217 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 PRR23D2P0DMB1 279 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ACP2P11117 423 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 EPB42P16452 691 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ADCYAP1P18509 176 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 CELP19835 753 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 PAICSP22234 425 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 P2RY4P51582 365 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 RAB40BQ12829 278 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SNTB2Q13425 540 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SLC22A10Q63ZE4 541 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 FUT10Q6P4F1 479 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SYT12Q8IV01 421 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 CPXM2Q8N436 756 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 UBTD2Q8WUN7 234 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 VOPP1Q96AW1 172 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 AKAP7Q9P0M2 348 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 RASD1Q9Y272 281 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 EXOSC1Q9Y3B2 195 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 UBE2CO00762 179 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 CPN1P15169 458 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 RAD52P43351 418 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 MTNR1BP49286 362 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 MMP15P51511 669 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ACTR1AP61163 376 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SCARB2Q14108 478 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 HABP2Q14520 560 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DCAF4L1Q3SXM0 396 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ACER2Q5QJU3 275 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SLC6A19Q695T7 634 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SERINC5Q86VE9 423 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 UMODL1-AS1Q8N2C9 162 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 TBC1D19Q8N5T2 526 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 LINC01465Q8N7H1 131 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ASZ1Q8WWH4 475 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 NANSQ9NR45 359 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 GHRLQ9UBU3 117 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 HS3ST4Q9Y661 456 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 SMIM28A0A1B0GU29 152 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 GSAPA4D1B5 854 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 C5orf52A6NGY3 159 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 ARHGEF33A8MVX0 844 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 GPR182O15218 404 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 CRATP43155 626 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TTPAP49638 278 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 LIM2P55344 173 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 MANEAQ5SRI9 462 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 SFRP4Q6FHJ7 346 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF852Q6ZMS4 543 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 HDDC3Q8N4P3 179 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 SMIM14Q96QK8 99 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TRIB3Q96RU7 358 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 OR10A4Q9H209 315 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 ASB6Q9NWX5 421 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 NFKBIL1Q9UBC1 381 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TMEM200CA6NKL6 621 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 LCMT2O60294 686 aaKnown RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 MPGP29372 298 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 MC4RP32245 332 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PNPLA4P41247 253 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 EFNB1P98172 346 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-208ENST00000519004 DYRK1AQ13627 763 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 SV2CQ496J9 727 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 STX12Q86Y82 276 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 ARMC10Q8N2F6 343 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 TMIEQ8NEW7 156 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
PABPC1-208ENST00000519004 PIGKQ92643 395 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms