RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 REEP3Q6NUK4 255 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 MZT2BQ6NZ67 158 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 NFKBIDQ8NI38 313 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 TSACCQ96A04 125 aaPredicted RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 SPACA7Q96KW9 195 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 NRTNQ99748 197 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 DPH7Q9BTV6 452 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CNPPD1Q9BV87 410 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 NLNQ9BYT8 704 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 NMNAT1Q9HAN9 279 aaPredicted RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 EXOSC4Q9NPD3 245 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 LHX9Q9NQ69 397 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 GPR27Q9NS67 375 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 MRPS18AQ9NVS2 196 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 ZNF624Q9P2J8 865 aaPredicted RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 ASB4Q9Y574 426 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 A0A0A6YYD5 115 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CCDC163A0A0D9SF12 145 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 A8MU76 341 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 MYL12BO14950 172 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 PDPK1O15530 556 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 TPST2O60704 377 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 ETFAP13804 333 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CPEP16870 476 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 PEBP1P30086 187 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 BCL6P41182 706 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 STXBP1P61764 594 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 RPS15AP62244 130 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 PPP3R1P63098 170 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RPL6Q02878 288 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 DMWDQ09019 674 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 QPRTQ15274 297 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 SPATC1Q76KD6 591 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RD3Q7Z3Z2 195 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 UBE3DQ7Z6J8 389 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 FAM26EQ8N5C1 309 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 DEFB119Q8N690 84 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 GPBAR1Q8TDU6 330 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 NR4A3Q92570 626 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CIDECQ96AQ7 238 aaPredicted RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 ZBED6CLQ96FA7 236 aaPredicted RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 RNF170Q96K19 258 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 TMEM246Q9BRR3 403 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 GSDMCQ9BYG8 508 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 TMEM168Q9H0V1 697 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 SRMSQ9H3Y6 488 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RNF167Q9H6Y7 350 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RNF121Q9H920 327 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 ZSCAN32Q9NX65 697 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 SNX8Q9Y5X2 465 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 ISM1B1AKI9 464 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 TMCC2O75069 709 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 CSO75390 466 aaKnown RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 MYL9P24844 172 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 AK4P27144 223 aaPredicted RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 AQP1P29972 269 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 CHI3L1P36222 383 aaPredicted RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 SSR2P43308 183 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 PCBP4P57723 403 aaKnown RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 HYAL2Q12891 473 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 RIN1Q13671 783 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 SLC9A5Q14940 896 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 ZNF79Q15937 498 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 TMEM44Q2T9K0 475 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 C3orf38Q5JPI3 329 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 LCN1P1Q5VSP4 162 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 ZNF767PQ75MW2 155 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 VASH1Q7L8A9 365 aaPredicted RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 SLC22A18ASQ8N1D0 253 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 OR2L5Q8NG80 312 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 OR9Q2Q8NGE9 314 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 GPR151Q8TDV0 419 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 MAL2Q969L2 176 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 KLHDC7BQ96G42 594 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 SORBS1Q9BX66 1292 aaKnown RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 POLDIP3Q9BY77 421 aaKnown RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 ANKRA2Q9H9E1 313 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 C14orf119Q9NWQ9 140 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 SPHK1Q9NYA1 384 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 MRPL39Q9NYK5 338 aaKnown RBP17.18■□□□□ 0.34
SDC2-202ENST00000518385 GSTK1Q9Y2Q3 226 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 PCDHGB7Q9Y5F8 929 aa17.18■□□□□ 0.34
SDC2-202ENST00000518385 HEATR5BQ9P2D3 2071 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 SPTY2D1-AS1A0A0U1RR47 76 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 RTCAO00442 366 aaKnown RBP17.17■□□□□ 0.34
SDC2-202ENST00000518385 PCDH17O14917 1159 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 TNFSF14O43557 240 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 RAB36O95755 333 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 THEGLP0DJG4 465 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 SDC2P34741 201 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 MANFP55145 182 aaKnown RBP17.17■□□□□ 0.34
SDC2-202ENST00000518385 DSTNP60981 165 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 SOWAHCQ53LP3 525 aaPredicted RBP17.17■□□□□ 0.34
SDC2-202ENST00000518385 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 DCST1Q5T197 706 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 PAQR7Q86WK9 346 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 NRROSQ86YC3 692 aa17.17■□□□□ 0.34
SDC2-202ENST00000518385 Q8N9G6 341 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms