RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 FDCSPQ8NFU4 85 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 XAGE5Q8WWM1 108 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 PIK3R3Q92569 461 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 RAB8BQ92930 207 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 ECSITQ9BQ95 431 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 A4GALTQ9NPC4 353 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 CMTM6Q9NX76 183 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 TAS2R1Q9NYW7 299 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 ABI3Q9P2A4 366 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 MRTO4Q9UKD2 239 aaKnown RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 CBLCQ9ULV8 474 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 PCDHGA9Q9Y5G4 932 aaKnown RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 MAP1BP46821 2468 aaKnown RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 LAMA5O15230 3695 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 GXYLT2A0PJZ3 443 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 NME4O00746 187 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 MAN1A2O60476 641 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 TMED10P49755 219 aaKnown RBP19.36■□□□□ 0.69
LSM6-207ENST00000515311 SSR4P51571 173 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 PLCXD2Q0VAA5 305 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 DECR1Q16698 335 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 CYP51A1Q16850 503 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 ARHGAP11BQ3KRB8 267 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 GCNT6Q5T4J0 391 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 OPN5Q6U736 354 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 C16orf62Q7Z3J2 963 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 CALHM3Q86XJ0 350 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 DEFB107AQ8IZN7 70 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 OR4N2Q8NGD1 307 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 FAM110BQ8TC76 370 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 SLC7A6OSQ96CW6 309 aaPredicted RBP19.36■□□□□ 0.69
LSM6-207ENST00000515311 RMND5BQ96G75 393 aaPredicted RBP19.36■□□□□ 0.69
LSM6-207ENST00000515311 LMF1Q96S06 567 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 PRORYQ9H606 182 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 TMEM38AQ9H6F2 299 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 ZNF552Q9H707 407 aaPredicted RBP19.36■□□□□ 0.69
LSM6-207ENST00000515311 STMN3Q9NZ72 180 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 TMEM181Q9P2C4 612 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 P2RX2Q9UBL9 471 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 NPFFR2Q9Y5X5 522 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 KCNE3Q9Y6H6 103 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 MGAQ8IWI9 3026 aa19.36■□□□□ 0.69
LSM6-207ENST00000515311 DSPP15924 2871 aaKnown RBP19.36■□□□□ 0.69
LSM6-207ENST00000515311 ZNF354AO60765 605 aaPredicted RBP19.35■□□□□ 0.69
LSM6-207ENST00000515311 DNAJA2O60884 412 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 KCNK2O95069 426 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 GUSBP08236 651 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 TFPTP0C1Z6 253 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 FBXO45P0C2W1 286 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 PSMD4P55036 377 aaKnown RBP19.35■□□□□ 0.69
LSM6-207ENST00000515311 EEFSECP57772 596 aaKnown RBP19.35■□□□□ 0.69
LSM6-207ENST00000515311 MFAP5Q13361 173 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 RAPSNQ13702 412 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 ADRM1Q16186 407 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 SPATS1Q496A3 300 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 DCST2Q5T1A1 773 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 LYPD8Q6UX82 237 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 GPALPP1Q8IXQ4 340 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 BEST3Q8N1M1 668 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 METTL25Q8N6Q8 603 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 BCORP1Q8N888 145 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 OR10A6Q8NH74 314 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 ASB15Q8WXK1 588 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 TMBIM1Q969X1 311 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 OMA1Q96E52 524 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 TRNT1Q96Q11 434 aaKnown RBP19.35■□□□□ 0.69
LSM6-207ENST00000515311 G6PC3Q9BUM1 346 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 RNF32Q9H0A6 362 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 ZNF451Q9Y4E5 1061 aa19.35■□□□□ 0.69
LSM6-207ENST00000515311 TMEM247A6NEH6 219 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 OR6C70A6NIJ9 312 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 TSPAN2O60636 221 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 PPM1BO75688 479 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 IL33O95760 270 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 NUDT7P0C024 238 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 KRT20P35900 424 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 SOX3P41225 446 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 GZMMP51124 257 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 RBBP4Q09028 425 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 FUT5Q11128 374 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 GNA13Q14344 377 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.34■□□□□ 0.69
LSM6-207ENST00000515311 DNAL1Q4LDG9 190 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 AP1ARQ63HQ0 302 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 IGFL2Q6UWQ7 119 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 BNC2Q6ZN30 1099 aaPredicted RBP19.34■□□□□ 0.69
LSM6-207ENST00000515311 ARHGAP24Q8N264 748 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 TMEM156Q8N614 296 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 SLC38A5Q8WUX1 472 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 DIO2Q92813 273 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 SPACA9Q96E40 222 aaPredicted RBP19.34■□□□□ 0.69
LSM6-207ENST00000515311 REXO5Q96IC2 774 aaKnown RBP19.34■□□□□ 0.69
LSM6-207ENST00000515311 ZNF583Q96ND8 569 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 CNTNAP3BQ96NU0 1288 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 SDF2Q99470 211 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 SMAD5Q99717 465 aaKnown RBP19.34■□□□□ 0.69
LSM6-207ENST00000515311 BTBD10Q9BSF8 475 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 CNTNAP3Q9BZ76 1288 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 POLE3Q9NRF9 147 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 ADA2Q9NZK5 511 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms