RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 HOXB9P17482 250 aaPredicted RBP9.09□□□□□ -0.95
VCAN-210ENST00000513960 TAS2R41P59536 307 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 ZNF763Q0D2J5 394 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 SPIN4Q56A73 249 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 PLPP4Q5VZY2 271 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 RAET1GQ6H3X3 334 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 ALKAL2Q6UX46 152 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 LILRA3Q8N6C8 439 aaPredicted RBP9.09□□□□□ -0.95
VCAN-210ENST00000513960 OR7G3Q8NG95 312 aa9.09□□□□□ -0.95
VCAN-210ENST00000513960 WRAP53Q9BUR4 548 aaKnown RBP9.09□□□□□ -0.95
VCAN-210ENST00000513960 LANCL1O43813 399 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 RGS11O94810 467 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PEPDP12955 493 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 SYT14P1Q58G82 188 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 GPR155Q7Z3F1 870 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 COMMD6Q7Z4G1 85 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 TRAPPC5Q8IUR0 188 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 OR10H4Q8NGA5 316 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 SPRYD4Q8WW59 207 aaPredicted RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 TTC9Q92623 222 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 ZNF582Q96NG8 517 aaPredicted RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 OR4K3Q96R72 315 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 MVB12BQ9H7P6 319 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 EQTNQ9NQ60 294 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 NFKBIL1Q9UBC1 381 aaPredicted RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 BTNL2Q9UIR0 455 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 FAM183AA6NL82 134 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 CPSF4LA6NMK7 179 aaKnown RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 SMAD9O15198 467 aaKnown RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 ELAVL4P26378 380 aaKnown RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 IMPA1P29218 277 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 EVX1P49640 407 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 TEKQ02763 1124 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 TMEM215Q68D42 235 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 SLC30A6Q6NXT4 461 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 C11orf88Q6PI97 169 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 LIPIQ6XZB0 460 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 CFAP206Q8IYR0 622 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 GPR135Q8IZ08 494 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 KLHL36Q8N4N3 616 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 OR11H4Q8NGC9 324 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 TMEM163Q8TC26 289 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 GIMAP1Q8WWP7 306 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 CREB3L1Q96BA8 519 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 VWCEQ96DN2 955 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 FCRL1Q96LA6 429 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 FERD3LQ96RJ6 166 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 GDF15Q99988 308 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 FUZQ9BT04 418 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 C12orf10Q9HB07 376 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 NUMA1Q14980 2115 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 RHOP08100 348 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PDHA2P29803 388 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PPP2R1BP30154 601 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PRLHRP49683 370 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 KIAA1024LP59773 190 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 LGALS3BPQ08380 585 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 SLC25A25Q6KCM7 469 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PODNL1Q6PEZ8 512 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 DPPA4Q7L190 304 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 TRMT11Q7Z4G4 463 aaKnown RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 PRSS42Q7Z5A4 293 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 PGBD3Q8N328 593 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 OR11H7Q8NGC8 314 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 MSLNLQ96KJ4 702 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 ZNF607Q96SK3 696 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 ZCCHC2Q9C0B9 1178 aaKnown RBP9.08□□□□□ -0.96
VCAN-210ENST00000513960 OR10A4Q9H209 315 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 THSD1Q9NS62 852 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 RASD1Q9Y272 281 aa9.08□□□□□ -0.96
VCAN-210ENST00000513960 FAAHO00519 579 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ERAL1O75616 437 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 MRPL3P09001 348 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 SYN1P17600 705 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 AGFG1P52594 562 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 PNLIPRP1P54315 467 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 FAM27D1Q5T7N8 215 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 SLC36A4Q6YBV0 504 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ESPNLQ6ZVH7 1005 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 BOLLQ8N9W6 283 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 ZNF527Q8NB42 609 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 SLC7A13Q8TCU3 470 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 NEIL2Q969S2 332 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 HHIPQ96QV1 700 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 DDOQ99489 341 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 GINS4Q9BRT9 223 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 MARVELD1Q9BSK0 173 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ZNF69Q9UC07 566 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 TMEM5Q9Y2B1 443 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 CCDC88CQ9P219 2028 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ZNF106Q9H2Y7 1883 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 SLC5A10A0PJK1 596 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 FAM170BA6NMN3 283 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 DVL2O14641 736 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 SLC9A3R1O14745 358 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms