RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CT45A8P0DMV1 189 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 CT45A9P0DMV2 189 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 ACP2P11117 423 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 MATN1P21941 496 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 ABCD3P28288 659 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 TRHRP34981 398 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 KRT20P35900 424 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SOX3P41225 446 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 MAP3K8P41279 467 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PSMD4P55036 377 aaKnown RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 CORO7P57737 925 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PLCXD2Q0VAA5 305 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 FADDQ13158 208 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 KCNAB2Q13303 367 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 NFYCQ13952 458 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 NNATQ16517 81 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 DUSP5Q16690 384 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7□□□□□ -1.29
HMGXB3-204ENST00000513318 GTDC1Q4AE62 458 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 CYP27C1Q4G0S4 372 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 CT45A2Q5DJT8 189 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PIGGQ5H8A4 983 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 OPN5Q6U736 354 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 IGFL3Q6UXB1 125 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 DLEU7Q6UYE1 221 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 NPSR1Q6W5P4 371 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 C16orf47Q6ZP98 133 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 LINC00696Q6ZRV3 163 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 TRPM8Q7Z2W7 1104 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PRICKLE2Q7Z3G6 844 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 WDR53Q7Z5U6 358 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 RNF130Q86XS8 419 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC44A2Q8IWA5 706 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 MSRB3Q8IXL7 192 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 GPALPP1Q8IXQ4 340 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC34A3Q8N130 599 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 CLEC4FQ8N1N0 589 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 FITM2Q8N6M3 262 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 COX18Q8N8Q8 333 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC16A11Q8NCK7 471 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 OR52N2Q8NGI0 321 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 C9orf43Q8TAL5 461 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 FBXO30Q8TB52 745 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 GPR151Q8TDV0 419 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 ADAMTS15Q8TE58 950 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC9A6Q92581 669 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 ROPN1LQ96C74 230 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 RCN3Q96D15 328 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SPACA9Q96E40 222 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 AURKBQ96GD4 344 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 C16orf58Q96GQ5 468 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 CGREF1Q99674 301 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 UTP23Q9BRU9 249 aaKnown RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 YIPF4Q9BSR8 244 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 OR51I1Q9H343 314 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PIGUQ9H490 435 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SERHL2Q9H4I8 314 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC6A13Q9NSD5 602 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 GID8Q9NWU2 228 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 HPF1Q9NWY4 346 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC25A37Q9NYZ2 338 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 STMN3Q9NZ72 180 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 SLAMF8Q9P0V8 285 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 MRTO4Q9UKD2 239 aaKnown RBP7□□□□□ -1.29
HMGXB3-204ENST00000513318 OR10H1Q9Y4A9 318 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PCDHGB3Q9Y5G1 929 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 GMEB1Q9Y692 573 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 PIEZO2Q9H5I5 2752 aa7□□□□□ -1.29
HMGXB3-204ENST00000513318 TLN1Q9Y490 2541 aaKnown RBP6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 SHANK1Q9Y566 2161 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 ARHGAP21Q5T5U3 1957 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 C15orf38-AP3S2A0A0A6YYH1 394 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 OR6C70A6NIJ9 312 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 EVPLLA8MZ36 301 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 FXYD1O00168 92 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 DPM1O60762 260 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF354AO60765 605 aaPredicted RBP6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 NME6O75414 186 aaPredicted RBP6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 PPM1BO75688 479 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 UNC5CO95185 931 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 WDPCPO95876 746 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 AK1P00568 194 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 FAM87AP0C7U9 286 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 SFTPCP11686 197 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 NAGAP17050 411 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 IL12BP29460 328 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 PIGAP37287 484 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 CYB561P49447 251 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 MAN2A2P49641 1150 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 NUDT2P50583 147 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 HLCSP50747 726 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 MVDP53602 400 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 RPS26P62854 115 aaKnown RBP6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 POU6F2P78424 691 aaPredicted RBP6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 ARG2P78540 354 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 CBX1P83916 185 aa6.99□□□□□ -1.29
HMGXB3-204ENST00000513318 OC90Q02509 493 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms