RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 OR52E8Q6IFG1 317 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 GRHL2Q6ISB3 625 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 CYP20A1Q6UW02 462 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 GBP7Q8N8V2 638 aaPredicted RBP12.55□□□□□ -0.4
SPCS3-204ENST00000513139 MAPK1IP1LQ8NDC0 245 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 RDH11Q8TC12 318 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 REPS1Q96D71 796 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 SFXN2Q96NB2 322 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
SPCS3-204ENST00000513139 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 OVOL3O00110 214 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 TMPRSS11DO60235 418 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 ERLIN1O75477 346 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 EEDO75530 441 aaKnown RBP12.54□□□□□ -0.4
SPCS3-204ENST00000513139 C2P06681 752 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 THBDP07204 575 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 SNRPAP09012 282 aaKnown RBP12.54□□□□□ -0.4
SPCS3-204ENST00000513139 NUDT17P0C025 328 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 PEPDP12955 493 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 CRABP2P29373 138 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 TYK2P29597 1187 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 IRF9Q00978 393 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 DLG1Q12959 904 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 CUL3Q13618 768 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 OR4D1Q15615 310 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 OR4K14Q8NGD5 310 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 OMA1Q96E52 524 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
SPCS3-204ENST00000513139 LCORQ96JN0 433 aaPredicted RBP12.54□□□□□ -0.4
SPCS3-204ENST00000513139 RNF122Q9H9V4 155 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
SPCS3-204ENST00000513139 HEY2Q9UBP5 337 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 DTX4Q9Y2E6 619 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
SPCS3-204ENST00000513139 CADP27708 2225 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 A0A096LPK6 155 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 A0A1W2PS29 197 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 PGRMC2O15173 223 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 ZIC3O60481 467 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 UGT2B11O75310 529 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 S100BP04271 92 aaPredicted RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 CD1DP15813 335 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 CNTFP26441 200 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 SERPINB8P50452 374 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 EEFSECP57772 596 aaKnown RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 RPS4XP62701 263 aaKnown RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 PHEXP78562 749 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 HMGCS1Q01581 520 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 IFFO1Q0D2I5 559 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 DDX39BQ13838 428 aaKnown RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 LGSNQ5TDP6 509 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 RNF175Q8N4F7 328 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 TMCO6Q96DC7 493 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 UBXN10Q96LJ8 280 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
SPCS3-204ENST00000513139 KLHL4Q9C0H6 718 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 VPS11Q9H270 941 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 OPTCQ9UBM4 332 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 ZNF175Q9Y473 711 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
SPCS3-204ENST00000513139 A0A1W2PPM1 405 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 OR6C70A6NIJ9 312 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 K7EPI3 171 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 TO15178 435 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 PLAUP00749 431 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 CPMP14384 443 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 DRD5P21918 477 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 MAGEA12P43365 314 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 XKP51811 444 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 SIRPAP78324 504 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 OCRLQ01968 901 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 MAP4K2Q12851 820 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 C10orf62Q5T681 223 aaPredicted RBP12.52□□□□□ -0.41
SPCS3-204ENST00000513139 LIPJQ5W064 366 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 ANKRD34AQ69YU3 496 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 DNM1P46Q6ZS02 220 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 TDRPQ86YL5 185 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 CENPLQ8N0S6 344 aaPredicted RBP12.52□□□□□ -0.41
SPCS3-204ENST00000513139 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.41
SPCS3-204ENST00000513139 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 UBTD2Q8WUN7 234 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 KCTD4Q8WVF5 259 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 FIG4Q92562 907 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 NXNL1Q96CM4 212 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 DKKL1Q9UK85 242 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms