RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZZZ3Q8IYH5 903 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 OR4N4Q8N0Y3 316 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 AMER3Q8N944 861 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 CDC26Q8NHZ8 85 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 PYDC1Q8WXC3 89 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 TANKQ92844 425 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SLCO4A1Q96BD0 722 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 TBC1D20Q96BZ9 403 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 AMDHD1Q96NU7 426 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 YY1AP1Q9H869 796 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 FAM60AQ9NP50 221 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SIRT3Q9NTG7 399 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 GIMAP4Q9NUV9 329 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 DCAF13Q9NV06 445 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 GPATCH2Q9NW75 528 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 NDOR1Q9UHB4 597 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 FBXL4Q9UKA2 621 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 UTS2RQ9UKP6 389 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ATG4BQ9Y4P1 393 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 LRRC42Q9Y546 428 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 H0Y3Z8 333 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 H0YIG0 161 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CXCR6O00574 342 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CYR61O00622 381 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 ASNA1O43681 348 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CNOT3O75175 753 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 PRSS23O95084 383 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 B3GALT4O96024 378 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 STATHP02808 62 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 UMODP07911 640 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 RAP2AP10114 183 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CSNK2A2P19784 350 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 AGAP20933 346 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 GALNSP34059 522 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 MPIP34949 423 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 MAGEA2P43356 314 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 ANXA11P50995 505 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 MANFP55145 182 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 RAB38P57729 211 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 RAB8AP61006 207 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 BTN3A2P78410 334 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 IGLV3-21P80748 117 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 GRM7Q14831 915 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 WLSQ5T9L3 541 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 INTS11Q5TA45 600 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 PRAMEF8Q5VWM4 474 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 PRAMEF7Q5VXH5 474 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 ANKRD26P1Q6NSI1 321 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 TLDC1Q6P9B6 456 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CXXC5Q7LFL8 322 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 PACRGLQ8N7B6 248 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 C11orf65Q8NCR3 313 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 OR56A1Q8NGH5 318 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 SUN3Q8TAQ9 357 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF675Q8TD23 568 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CANT1Q8WVQ1 401 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 NCLNQ969V3 563 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CIDECQ96AQ7 238 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 AURKBQ96GD4 344 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 THOC3Q96J01 351 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 FOXC2Q99958 501 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC35A5Q9BS91 424 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 UGT2B28Q9BY64 529 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 DLL4Q9NR61 685 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 PLA2G3Q9NZ20 509 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 SERTAD3Q9UJW9 196 aa9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 SAMD4AQ9UPU9 718 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-217ENST00000512274 NIPBLQ6KC79 2804 aaeCLIP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 A0A087WV62 115 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC19A2O60779 497 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 CPSF4O95639 269 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 F10P00742 488 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ATP1B1P05026 303 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 GSNP06396 782 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ARAFP10398 606 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 MSX2P35548 267 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 PCBP3P57721 371 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 VSX2P58304 361 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ARG2P78540 354 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 RBPJQ06330 500 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 RUNX2Q13950 521 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 FAM214AQ32MH5 1076 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 DEFB134Q4QY38 66 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 FAM98BQ52LJ0 330 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 EXOSC6Q5RKV6 272 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ISLR2Q6UXK2 745 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 PDSS2Q86YH6 399 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 C10orf111Q8N326 155 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ANKFN1Q8N957 763 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 NRG4Q8WWG1 115 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 CNRIP1Q96F85 164 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 MAPKAP1Q9BPZ7 522 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 OSBPL10Q9BXB5 764 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 GLIPR2Q9H4G4 154 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms