RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TAS2R13Q9NYV9 303 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 TAS2R10Q9NYW0 307 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 A0A096LPK6 155 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 IQANK1A0A1B0GTG1 560 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 WASHC1A8K0Z3 465 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 GOLGA8RI6L899 631 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 CDC7O00311 574 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 RAMP1O60894 148 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 ICOSLGO75144 302 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 CDH16O75309 829 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 CD3EP07766 207 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 ABCB1P08183 1280 aaPredicted RBP8.15□□□□□ -1.1
NUP54-211ENST00000512151 CCDC166P0CW27 439 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 COX7A2P14406 83 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 ZNF37AP17032 561 aaPredicted RBP8.15□□□□□ -1.1
NUP54-211ENST00000512151 SERPINB8P50452 374 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 B3GALT5-AS1P59052 145 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 SP140Q13342 867 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 NRF1Q16656 503 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 KRT71Q3SY84 523 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TTMPQ5BVD1 217 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 C11orf71Q6IPW1 123 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TRIM40Q6P9F5 258 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TRABD2AQ86V40 505 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 THOC6Q86W42 341 aaKnown RBP8.15□□□□□ -1.1
NUP54-211ENST00000512151 IFNEQ86WN2 208 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 UBQLNLQ8IYU4 475 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TAGAPQ8N103 731 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 FAM76AQ8TAV0 307 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 FNDC9Q8TBE3 224 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 KCTD4Q8WVF5 259 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 FAM168AQ92567 244 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 HGDQ93099 445 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TP53INP1Q96A56 240 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 NXNL1Q96CM4 212 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 SFXN2Q96NB2 322 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 F2RL3Q96RI0 385 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 CACNG6Q9BXT2 260 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 PPCSQ9HAB8 311 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 POPDC3Q9HBV1 291 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TMBIM4Q9HC24 238 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 LYRM4Q9HD34 91 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 ARL15Q9NXU5 204 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 TRMT6Q9UJA5 497 aaKnown RBP8.15□□□□□ -1.1
NUP54-211ENST00000512151 FBXL2Q9UKC9 423 aa8.15□□□□□ -1.1
NUP54-211ENST00000512151 EXO1Q9UQ84 846 aaKnown RBP8.15□□□□□ -1.1
NUP54-211ENST00000512151 DPRXA6NFQ7 191 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 C17orf51A8MQB3 221 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 RTCAO00442 366 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 ZIC3O60481 467 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 SHOX2O60902 331 aaPredicted RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 PRKRAO75569 313 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 LY6HO94772 140 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 AQP8O94778 261 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 CD1DP15813 335 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 TYK2P29597 1187 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 SSTR4P31391 388 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 KCNC1P48547 511 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 SUCLG1P53597 346 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 SLC12A2P55011 1212 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 C21orf58P58505 322 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 BSPH1Q075Z2 132 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 PCDH1Q08174 1060 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 ILF2Q12905 390 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 TSC22D1Q15714 1073 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 LGSNQ5TDP6 509 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 RAPH1Q70E73 1250 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 EXOC3L1Q86VI1 746 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 CENPLQ8N0S6 344 aaPredicted RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 ZNF619Q8N2I2 560 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 RIBC1Q8N443 379 aaPredicted RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 ZFAND2BQ8WV99 257 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 PROX1Q92786 737 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 GCDHQ92947 438 aaPredicted RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 ADIPOR1Q96A54 375 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 ARL8AQ96BM9 186 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 S100PBPQ96BU1 408 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 MTBPQ96DY7 904 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 LINGO1Q96FE5 620 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 TSPAN17Q96FV3 270 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 PDLIM5Q96HC4 596 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 GPR78Q96P69 363 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 OSBPL11Q9BXB4 747 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 REXO4Q9GZR2 422 aaKnown RBP8.14□□□□□ -1.11
NUP54-211ENST00000512151 VPS11Q9H270 941 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 ALG2Q9H553 416 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 METTL7AQ9H8H3 244 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 ACTR8Q9H981 624 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 PLSCR4Q9NRQ2 329 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 CLEC4AQ9UMR7 237 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 SLC22A14Q9Y267 594 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 ACOT9Q9Y305 439 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 DYRK1BQ9Y463 629 aa8.14□□□□□ -1.11
NUP54-211ENST00000512151 A0A088AWK7 358 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 IGHV4-61A0A0C4DH41 118 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 C2orf92A0A1B0GVN3 265 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 A0A1W2PS29 197 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms