RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MILR1Q7Z6M3 343 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SLC35F6Q8N357 371 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 PPM1NQ8N819 430 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 OR5M1Q8NGP8 315 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 NXNL1Q96CM4 212 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 HS6ST2Q96MM7 605 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 ATOH8Q96SQ7 321 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 LRRC1Q9BTT6 524 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 NTMT1Q9BV86 223 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 MRPL1Q9BYD6 325 aaKnown RBP9.32□□□□□ -0.92
MBD4-208ENST00000509828 AMBRA1Q9C0C7 1298 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 ELOVL6Q9H5J4 265 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SAYSD1Q9NPB0 183 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SENP1Q9P0U3 644 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 ADAM29Q9UKF5 820 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SNX12Q9UMY4 172 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 ZNF337Q9Y3M9 751 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 PCDHA9Q9Y5H5 950 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 MXRA5Q9NR99 2828 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 H0YC42 278 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 TO15178 435 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 NDUFB5O43674 189 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 SEC31AO94979 1220 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 SYNGR4O95473 234 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 CGAP01215 116 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 THBDP07204 575 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 CD3EP07766 207 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 PCSK2P16519 638 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 EIF1AXP47813 144 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 SUCLG1P53597 346 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 ALDH18A1P54886 795 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 TPD52P55327 224 aaPredicted RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 MRPS35P82673 323 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 FAPQ12884 760 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 LTB4RQ15722 352 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 SH2D4BQ5SQS7 431 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 LGSNQ5TDP6 509 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 BEND4Q6ZU67 534 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 C3orf62Q6ZUJ4 267 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 C22orf34Q6ZV56 151 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 SLC44A2Q8IWA5 706 aaPredicted RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 LRRC8AQ8IWT6 810 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 WDR20Q8TBZ3 569 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 KCTD4Q8WVF5 259 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 FBXW5Q969U6 566 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 EFHD2Q96C19 240 aaPredicted RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 SLC35A4Q96G79 324 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 MARK4Q96L34 752 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 MCMBPQ9BTE3 642 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 BEX2Q9BXY8 128 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 ACTR6Q9GZN1 396 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 ALG2Q9H553 416 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 NOL11Q9H8H0 719 aaKnown RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 RNF122Q9H9V4 155 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 GIMAP4Q9NUV9 329 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 NMRK1Q9NWW6 199 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 MED11Q9P086 117 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 CLEC4AQ9UMR7 237 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 SLC12A4Q9UP95 1085 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 LIPT1Q9Y234 373 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 GPR55Q9Y2T6 319 aaPredicted RBP9.31□□□□□ -0.92
MBD4-208ENST00000509828 SNX24Q9Y343 169 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 ZANQ9Y493 2812 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 DSCAMO60469 2012 aa9.31□□□□□ -0.92
MBD4-208ENST00000509828 A0A1W2PP18 115 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 EIF1AYO14602 144 aaKnown RBP9.3□□□□□ -0.92
MBD4-208ENST00000509828 GMFGO60234 142 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CBX7O95931 251 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 ACVR1BP36896 505 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CDKN1AP38936 164 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 EMDP50402 254 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 PNLIPRP2P54317 469 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CLDN20P56880 219 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CORO7P57737 925 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 PSPHP78330 225 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 KRTAP1-1Q07627 177 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 MGAT2Q10469 447 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 DLG1Q12959 904 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 ZKSCAN8Q15776 578 aaPredicted RBP9.3□□□□□ -0.92
MBD4-208ENST00000509828 CTU2Q2VPK5 515 aaKnown RBP9.3□□□□□ -0.92
MBD4-208ENST00000509828 FRG2Q64ET8 278 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 FAM180BQ6P0A1 224 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 GAS2L3Q86XJ1 694 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CCDC116Q8IYX3 515 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 CEP112Q8N8E3 955 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 L3MBTL4Q8NA19 623 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 OR6K3Q8NGY3 331 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 UHMK1Q8TAS1 419 aaKnown RBP9.3□□□□□ -0.92
MBD4-208ENST00000509828 TRPC4APQ8TEL6 797 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 SMAP2Q8WU79 429 aaPredicted RBP9.3□□□□□ -0.92
MBD4-208ENST00000509828 KAT2AQ92830 837 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 FRG2BQ96QU4 278 aa9.3□□□□□ -0.92
MBD4-208ENST00000509828 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms