RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 IKZF1Q13422 519 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SEMA3AQ14563 771 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 KCNJ11Q14654 390 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 TSC22D1Q15714 1073 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 TAB1Q15750 504 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 BCL2A1Q16548 175 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 PARP6Q2NL67 630 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 TSTD2Q5T7W7 516 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 C6orf163Q5TEZ5 329 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 RAET1LQ5VY80 246 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MRNIPQ6NTE8 343 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ALKBH5Q6P6C2 394 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 TRIM40Q6P9F5 258 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 KLHL17Q6TDP4 642 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 LCTLQ6UWM7 567 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 DEF8Q6ZN54 512 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 EXOC3L1Q86VI1 746 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 OR4N5Q8IXE1 308 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 C9orf40Q8IXQ3 194 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 LRRC56Q8IYG6 542 aaPredicted RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 PRELID2Q8N945 189 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 TOR1AIP2Q8NFQ8 470 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 OR13J1Q8NGT2 312 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MRAPQ8TCY5 172 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 DOK4Q8TEW6 326 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 PPWD1Q96BP3 646 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 ZBTB8AQ96BR9 441 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 CTHRC1Q96CG8 243 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MISP3Q96FF7 219 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SNF8Q96H20 258 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SNX18Q96RF0 628 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ERGIC2Q96RQ1 377 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SERINC2Q96SA4 455 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 G6PC3Q9BUM1 346 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 JAM3Q9BX67 310 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 OSBPL11Q9BXB4 747 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 HEMGNQ9BXL5 484 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 OR2B2Q9GZK3 357 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 BPESC1Q9GZL8 116 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 WWTR1Q9GZV5 400 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SLITRK2Q9H156 845 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 CDIP1Q9H305 208 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 RNF122Q9H9V4 155 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 NTN4Q9HB63 628 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 EMC7Q9NPA0 242 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 FBXO34Q9NWN3 711 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 HIF1ANQ9NWT6 349 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MCTS1Q9ULC4 181 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 CLEC4AQ9UMR7 237 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MGAT4BQ9UQ53 548 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 EXO1Q9UQ84 846 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 DTX4Q9Y2E6 619 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 CRYL1Q9Y2S2 319 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ZNF175Q9Y473 711 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 PPIAL4AQ9Y536 164 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ATP23Q9Y6H3 246 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 MED12LQ86YW9 2145 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 OR6C76A6NM76 312 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 EFCAB8A8MWE9 144 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 VWC2LB2RUY7 222 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SHISA9B4DS77 424 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 C22orf46C9J442 243 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 E7EQL1 145 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SHOX2O60902 331 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 ICOSLGO75144 302 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ULK1O75385 1050 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF189O75820 626 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 PDE5AO76074 875 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 PRKD3O94806 890 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ADAP00813 363 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 KNG1P01042 644 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TUBBP07437 444 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 RHOXF2BP0C7M4 288 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 DHRS4L1P0CG22 281 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 MPC1LP0DKB6 136 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SMIM10L1P0DMW3 83 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 NPPBP16860 134 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CPN2P22792 545 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TLX1P31314 330 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 PCGF2P35227 344 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SKIV2L2P42285 1042 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 CDKN2BP42772 138 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SLC1A1P43005 524 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 STT3AP46977 705 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ARFIP2P53365 341 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CDH15P55291 814 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 LIM2P55344 173 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CLDN15P56746 228 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CORO7P57737 925 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 LOXL3P58215 753 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 EIF3EP60228 445 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 SNRPD2P62316 118 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 UBA52P62987 128 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 HERVK_113P63132 956 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ERVK-8P63133 956 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF844Q08AG5 666 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 KIF5AQ12840 1032 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms