RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SPTY2D1-AS1A0A0U1RR47 76 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 GSAPA4D1B5 854 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 RAB36O95755 333 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 POLR2CP19387 275 aaPredicted RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 HIST1H1TP22492 207 aaPredicted RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 CERS1P27544 350 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 HTR3AP46098 478 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 CRISP3P54108 245 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 BNC1Q01954 994 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 EIF2B5Q13144 721 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 FZD2Q14332 565 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 UBXN2BQ14CS0 331 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 PGBD2Q6P3X8 592 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 ABHD17CQ6PCB6 329 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 XKRXQ6PP77 449 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 TRIM48Q8IWZ4 208 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 DEFB119Q8N690 84 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 GDPD1Q8N9F7 314 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 FAM181AQ8N9Y4 354 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 KCT2Q8NC54 265 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 TSTD1Q8NFU3 115 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 AP3S1Q92572 193 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 IL4I1Q96RQ9 567 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SARGQ9BW04 601 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 TSSK6Q9BXA6 273 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 FOXQ1Q9C009 403 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SEMA3GQ9NS98 782 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 MRPS18AQ9NVS2 196 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 RHCGQ9UBD6 479 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SEC14L3Q9UDX4 400 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 APOBEC3BQ9UH17 382 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SLC9A8Q9Y2E8 581 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 CMAHPQ9Y471 501 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 OR6C74A6NCV1 312 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM47E-STBD1D6RA91 191 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 STK25O00506 426 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 MAN2B1O00754 1011 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 RGS5O15539 181 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 B4GALT2O60909 372 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 DRD2P14416 443 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CPEP16870 476 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 AHRP35869 848 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 IFNGR2P38484 337 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 DDOSTP39656 456 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CCR5P51681 352 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PSPHP78330 225 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF91Q05481 1191 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLAMF1Q13291 335 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 C1orf61Q13536 156 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 GPR50Q13585 617 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SEC23BQ15437 767 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CYP27C1Q4G0S4 372 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM35AQ53FP2 167 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 C3orf38Q5JPI3 329 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 VN1R4Q7Z5H5 301 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PAQR7Q86WK9 346 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF761Q86XN6 746 aaPredicted RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ACOT4Q8N9L9 421 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 OR2L5Q8NG80 312 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 GPR32P1Q8NGA4 272 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 GPBAR1Q8TDU6 330 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC25A46Q96AG3 418 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC6A18Q96N87 628 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ORAI3Q9BRQ5 295 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 FUZQ9BT04 418 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PRRG3Q9BZD7 231 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 C11orf16Q9NQ32 467 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PRDM7Q9NQW5 492 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SIRT3Q9NTG7 399 aaPredicted RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TAS2R16Q9NYV7 291 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SNX7Q9UNH6 387 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ATG4BQ9Y4P1 393 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A1W2PPC4 97 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A1W2PS29 197 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 HMX3A6NHT5 357 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CENPBD1B2RD01 187 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PGRMC2O15173 223 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SEC14L5O43304 696 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 IDH3BO43837 385 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TPST2O60704 377 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CTSVO60911 334 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 NME6O75414 186 aaPredicted RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TNFP01375 233 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 NR2F6P10588 404 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 UGT2B7P16662 529 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ATP5A1P25705 553 aaKnown RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CCT3P49368 545 aaKnown RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TARDBPQ13148 414 aaKnown RBP eCLIP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 FZD5Q13467 585 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ASAH1Q13510 395 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC9A5Q14940 896 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 LARS2Q15031 903 aaKnown RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM44Q2T9K0 475 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PRAMEF8Q5VWM4 474 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PRAMEF7Q5VXH5 474 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TNFAIP8L2Q6P589 184 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms