RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TCEAL3Q969E4 200 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 FCRL4Q96PJ5 515 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 EPYCQ99645 322 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 C20orf24Q9BUV8 137 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NFKBIZQ9BYH8 718 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TLNRD1Q9H1K6 362 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 WDR13Q9H1Z4 485 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TMEM185BQ9H7F4 350 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TMEM138Q9NPI0 162 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 MEPEQ9NQ76 525 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 THSD1Q9NS62 852 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ASF1BQ9NVP2 202 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ARL15Q9NXU5 204 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 RPS6KB2Q9UBS0 482 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 MBD1Q9UIS9 605 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 FBXL3Q9UKT7 428 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PIN4Q9Y237 131 aaKnown RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 A0A1B0GVI7 797 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC9B1P1A6NJY1 282 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ZAR1LA6NP61 321 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ARHGEF33A8MVX0 844 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ADM5C9JUS6 153 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SOX15O60248 233 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PRAMEF4O60810 478 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 KHDRBS3O75525 346 aaKnown RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 C6orf47O95873 294 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PEX11BO96011 259 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SULT1A3P0DMM9 295 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SULT1A4P0DMN0 295 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ZNF35P13682 527 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 DRD2P14416 443 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ST6GAL1P15907 406 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 EPB42P16452 691 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TRIM23P36406 574 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PITPNBP48739 271 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 STARP49675 285 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 HCCSP53701 268 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TWF1Q12792 350 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 EFEMP1Q12805 493 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SMCO1Q147U7 214 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 Q3ZCU0 254 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PLK5Q496M5 336 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SYT14P1Q58G82 188 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PRAMEF9Q5VWM5 478 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 METAP1DQ6UB28 335 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NUDT18Q6ZVK8 323 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ARMCX2Q7L311 632 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 LINGO2Q7L985 606 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 OVCH2Q7RTZ1 564 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 CRYBG2Q8N1P7 616 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 HJURPQ8NCD3 748 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TRPV1Q8NER1 839 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 C9orf43Q8TAL5 461 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SPATA5L1Q9BVQ7 753 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PINK1Q9BXM7 581 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 BTBD1Q9H0C5 482 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NMUR1Q9HB89 426 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ACSS1Q9NUB1 689 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 CNIH4Q9P003 139 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 FTSJ1Q9UET6 329 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 COL2A1P02458 1487 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 LOC100509620A0A075B734 347 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 M0R3H8 397 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ST8SIA5O15466 376 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 RP2O75695 350 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 UGT2B7P16662 529 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 EPORP19235 508 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 HOXA11P31270 313 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 CSF2RBP32927 897 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 GPX4P36969 197 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 WNT3P56703 355 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 IL10RBQ08334 325 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 MLLT11Q13015 90 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 GK2Q14410 553 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 OR7A5Q15622 319 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 CD276Q5ZPR3 534 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF660Q6AZW8 331 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 OR7E24Q6IFN5 339 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ALKBH2Q6NS38 261 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 GSG1LQ6UXU4 331 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 SAMD7Q7Z3H4 446 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 CFAP206Q8IYR0 622 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ZSCAN1Q8NBB4 408 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 GPR26Q8NDV2 337 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 REPS2Q8NFH8 660 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 PROKR2Q8NFJ6 384 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 KLK6Q92876 244 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 POM121Q96HA1 1249 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 RPRD1AQ96P16 312 aaPredicted RBP6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 PTDSS2Q9BVG9 487 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 ENKD1Q9H0I2 346 aa6.83□□□□□ -1.32
LIMCH1-207ENST00000508466 C20orf85Q9H1P6 137 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms