RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SPACA9Q96E40 222 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ZBED6CLQ96FA7 236 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ATP6V1G3Q96LB4 118 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 GAL3ST4Q96RP7 486 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 PRPF18Q99633 342 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 PAIP2Q9BPZ3 127 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 TUBB1Q9H4B7 451 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 REEP4Q9H6H4 257 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ZNF395Q9H8N7 513 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 SACM1LQ9NTJ5 587 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ACSS1Q9NUB1 689 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ATAD3AQ9NVI7 634 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 TAS2R9Q9NYW1 312 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 CNIH4Q9P003 139 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 ZDHHC2Q9UIJ5 367 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 EIF3LQ9Y262 564 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 CR1P17927 2039 aa8.44□□□□□ -1.06
UBE2D3-223ENST00000508249 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 MYOCOSA0A1B0GUC4 107 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 WDR91A4D1P6 747 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ANKRD33BA6NCL7 494 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 TRPC5OSA6NMA1 111 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 WASHC1A8K0Z3 465 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 FAM171A2A8MVW0 826 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ACOT7O00154 380 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 TO15178 435 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PDPK1O15530 556 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PEX1O43933 1283 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PDE9AO76083 593 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 SOX30O94993 753 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 P04436 131 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 FBXO45P0C2W1 286 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 CT62P0C5K7 136 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 SDC1P18827 310 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ENDOUP21128 410 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 BGNP21810 368 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 GPX3P22352 226 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ACVR2AP27037 513 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 SOX3P41225 446 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 C21orf58P58505 322 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 NKX6-1P78426 367 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 MRPS22P82650 360 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 EMX2Q04743 252 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 MGAT2Q10469 447 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PDE7AQ13946 482 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 RPS6KA2Q15349 733 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 NTRK2Q16620 822 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 SLC25A35Q3KQZ1 300 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 GALNTL6Q49A17 601 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 GXYLT1Q4G148 440 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 Q5PR19 223 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 C6orf136Q5SQH8 315 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 TMEM81Q6P7N7 255 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PAOXQ6QHF9 649 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 DGAT2L6Q6ZPD8 337 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ZNF321PQ8N8H1 164 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 FNDC5Q8NAU1 212 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 NAXEQ8NCW5 288 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 OR5M9Q8NGP3 310 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 OR2T11Q8NH01 316 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 GOT1L1Q8NHS2 421 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 CDC26Q8NHZ8 85 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PAQR8Q8TEZ7 354 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 ADIPOR1Q96A54 375 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 PPCDCQ96CD2 204 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 TUBGCP3Q96CW5 907 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 LCORQ96JN0 433 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 FAM173AQ9BQD7 235 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 HHATLQ9HCP6 504 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 BCAP29Q9UHQ4 241 aa8.43□□□□□ -1.06
UBE2D3-223ENST00000508249 DOCK7Q96N67 2140 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 FRG2CA6NGY1 282 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 KDM4EB2RXH2 506 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 TMEM233B4DJY2 109 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 NPIPA2E9PIF3 369 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 NPIPA3F8WFD2 350 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 SNNO75324 88 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 SKAP2O75563 359 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 GLSO94925 669 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 OR6B1O95007 311 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 CBX7O95931 251 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 IGHG3P01860 377 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 CLPSP04118 112 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 BCKDHAP12694 445 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 PRPS1L1P21108 318 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 S1PR1P21453 382 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 CNR1P21554 472 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 DRD5P21918 477 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 TACR1P25103 407 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 SSTR4P31391 388 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 ARRB2P32121 409 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 PPICP45877 212 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 NCBP2P52298 156 aaKnown RBP eCLIP8.42□□□□□ -1.063e-11■■□□□ 12.6
UBE2D3-223ENST00000508249 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 BST1Q10588 318 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 KEAP1Q14145 624 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 MPP2Q14168 576 aa8.42□□□□□ -1.06
UBE2D3-223ENST00000508249 MLC1Q15049 377 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms