RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FRKP42685 505 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC1A3P43003 542 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PITPNBP48739 271 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CCT3P49368 545 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARFIP1P53367 373 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC7A9P82251 487 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 EFNB1P98172 346 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CYP4F8P98187 520 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 HOXC5Q00444 222 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 FABP5Q01469 135 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CSTF1Q05048 431 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ST3GAL3Q11203 375 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TSPAN31Q12999 210 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TSTA3Q13630 321 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPR176Q14439 515 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARHGAP19Q14CB8 494 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SUZ12Q15022 739 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SF1Q15637 639 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF311Q5JNZ3 666 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RPS26P11Q5JNZ5 115 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLLU1Q5K131 121 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF14Q5SWL7 426 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 HENMT1Q5T8I9 393 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF13Q5VWM6 474 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 KHDRBS2Q5VWX1 349 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC22A10Q63ZE4 541 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CCSAPQ6IQ19 270 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADNP2Q6IQ32 1131 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RPL13AP3Q6NVV1 102 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TNFAIP8L2Q6P589 184 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM220Q6QAJ8 160 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TEX261Q6UWH6 196 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SERPINA13PQ6UXR4 307 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM64Q6YI46 380 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRILQ7L0X0 811 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 DPPA4Q7L190 304 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OTOP2Q7RTS6 562 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ASPGQ86U10 573 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC9B2Q86UD5 537 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 IQCHQ86VS3 1027 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NUDT13Q86X67 352 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMC8Q8IU68 726 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLITRK4Q8IW52 837 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 IQCF2Q8IXL9 164 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPALPP1Q8IXQ4 340 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TCEAL8Q8IYN2 117 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAB42Q8N4Z0 105 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARIH2OSQ8N7S6 290 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 LSMEM1Q8N8F7 131 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RASGEF1AQ8N9B8 481 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SYT14Q8NB59 555 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 DBF4BQ8NFT6 615 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TTLQ8NG68 377 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPR32P1Q8NGA4 272 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR56A1Q8NGH5 318 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR5M3Q8NGP4 307 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 WDR48Q8TAF3 677 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC7A13Q8TCU3 470 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 WFDC5Q8TCV5 224 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAET1EQ8TD07 263 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF480Q8WV37 535 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADAMTS14Q8WXS8 1223 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC9A6Q92581 669 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAD51AP1Q96B01 352 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RGMAQ96B86 450 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 UPRTQ96BW1 309 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RNF31Q96EP0 1072 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CMTM3Q96MX0 182 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ERMAPQ96PL5 475 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GFM1Q96RP9 751 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SPOCK3Q9BQ16 436 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 THAP7Q9BT49 309 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RIOK2Q9BVS4 552 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 BEX2Q9BXY8 128 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SAP130Q9H0E3 1048 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SPNS1Q9H2V7 528 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RHBGQ9H310 441 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR51B5Q9H339 312 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 FN3KQ9H479 309 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 DPEP2Q9H4A9 486 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CXorf36Q9H7Y0 433 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TBC1D17Q9HA65 648 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRIM36Q9NQ86 728 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 MRPL17Q9NRX2 175 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CYSLTR2Q9NS75 346 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 UCKL1Q9NWZ5 548 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 KLHL28Q9NXS3 571 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 DNAJB12Q9NXW2 375 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAAR2Q9P1P5 351 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PTGFRNQ9P2B2 879 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF624Q9P2J8 865 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TNFRSF10DQ9UBN6 386 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 EXTL2Q9UBQ6 330 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBQLN2Q9UHD9 624 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GLS2Q9UI32 602 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC6A14Q9UN76 642 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 A4GNTQ9UNA3 340 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 EXOGQ9Y2C4 368 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 FKBP7Q9Y680 259 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CACNG2Q9Y698 323 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms