RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 MED20Q9H944 212 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NMUR1Q9HB89 426 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 B3GAT2Q9NPZ5 323 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 FARSBQ9NSD9 589 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ATAD3AQ9NVI7 634 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NLGN3Q9NZ94 848 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 KLHL8Q9P2G9 620 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 P2RX2Q9UBL9 471 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MIOXQ9UGB7 285 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TUBGCP4Q9UGJ1 667 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ICAM5Q9UMF0 924 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 DUSP12Q9UNI6 340 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CSNK1G3Q9Y6M4 447 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF646O15015 1829 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 LAMA3Q16787 3333 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CENPFP49454 3210 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 A0A0U1RQV5 110 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 A0A1B0GUL7 405 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 EME2A4GXA9 379 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR5H15A6NDH6 313 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 A8MU76 341 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 E9PMD0 336 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 H0YCG3 227 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SGK494L7N484 410 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 E2F3O00716 465 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 MCF2LO15068 1137 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 TLX2O43763 284 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 LANCL1O43813 399 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 CA3P07451 260 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 FHP07954 510 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PATE4P0C8F1 98 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 EPB41P11171 864 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PRG2P13727 222 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 AXLP30530 894 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ADRA1AP35348 466 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 MTIF2P46199 727 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 CRYBA2P53672 197 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPL27P61353 136 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 HERVK_113P63132 956 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ERVK-8P63133 956 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 CYCSP99999 105 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 RFTN1Q14699 578 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 MTF1Q14872 753 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 FAM189A2Q15884 450 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 HAGHQ16775 308 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 TPD52L1Q16890 204 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PARP6Q2NL67 630 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 BEND3Q5T5X7 828 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 DCAF12Q5T6F0 453 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SULT1C3Q6IMI6 304 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PWWP2BQ6NUJ5 590 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 STEAP1BQ6NZ63 245 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRIM65Q6PJ69 517 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 KDELC1Q6UW63 502 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 Q6ZSR9 355 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 GPBP1Q86WP2 473 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 GCNT2Q8N0V5 402 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 FADS6Q8N9I5 356 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR10T2Q8NGX3 314 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 WDR36Q8NI36 951 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 FBXO25Q8TCJ0 367 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLCO2A1Q92959 643 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PNPLA2Q96AD5 504 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANKRD27Q96NW4 1050 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ALKBH3Q96Q83 286 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 OVOL2Q9BRP0 275 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ERP44Q9BS26 406 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 CRACR2AQ9BSW2 395 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ERVK-6Q9BXR3 956 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 DGCR6LQ9BY27 220 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 NLNQ9BYT8 704 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 NT5C3AQ9H0P0 336 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 TSPY26PQ9H489 355 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPAP3Q9H6T3 665 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 WDR76Q9H967 626 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 PLEKHA3Q9HB20 300 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC25A19Q9HC21 320 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 BAIAP2L1Q9UHR4 511 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SNX6Q9UNH7 406 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 FOXJ3Q9UPW0 622 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC6A5Q9Y345 797 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 MRPS18CQ9Y3D5 142 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRIOBPQ9H2D6 2365 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 CEP290O15078 2479 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZSWIM8A7E2V4 1837 aa2.75□□□□□ -1.97
TRAPPC11-205ENST00000506426 OTOFQ9HC10 1997 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 FER1L5A0AVI2 2057 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 SYNJ2BP-COX16A0A087WUM0 186 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 LOC390937A0A1W2PQ73 354 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 MEIOCA2RUB1 952 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GPR89AB7ZAQ6 455 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NEDD8-MDP1E9PL57 170 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 H3BTX0 84 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 KCNAB3O43448 404 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GMFGO60234 142 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 STK17BO94768 372 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR4F21O95013 312 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NDUFA7O95182 113 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 HPRP00739 348 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GPR89BP0CG08 455 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms