RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SEL1L2Q5TEA6 688 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 DCAF12L2Q5VW00 463 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD22Q5VYY1 191 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ACSM5Q6NUN0 579 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 C11orf63Q6NUN7 778 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SLC30A6Q6NXT4 461 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 FIP1L1Q6UN15 594 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CES3Q6UWW8 571 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 RAD9BQ6WBX8 426 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 Q6ZSV7 163 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 Q6ZT83 130 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 BZW1Q7L1Q6 419 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CHMP1BQ7LBR1 199 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SLC46A3Q7Z3Q1 461 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 STK32CQ86UX6 486 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PLCZ1Q86YW0 608 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 RFX6Q8HWS3 928 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 OR4N5Q8IXE1 308 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PRR22Q8IZ63 422 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SYCE1Q8N0S2 351 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 UBL4BQ8N7F7 174 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 KCTD6Q8NC69 237 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SLC16A11Q8NCK7 471 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ADCY4Q8NFM4 1077 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ADAMTS15Q8TE58 950 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 NEU4Q8WWR8 484 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 CFHR4Q92496 578 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 YIPF5Q969M3 257 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HAUS1Q96CS2 278 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 OR4K3Q96R72 315 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PANX2Q96RD6 677 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 GAL3ST4Q96RP7 486 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 DOK1Q99704 481 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 OSBPL11Q9BXB4 747 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 NPLQ9BXD5 320 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 MAK16Q9BXY0 300 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ISCUQ9H1K1 167 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TOR3AQ9H497 397 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ANKZF1Q9H8Y5 726 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 NHEJ1Q9H9Q4 299 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 MYNNQ9NPC7 610 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 FANCFQ9NPI8 374 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SMYD2Q9NRG4 433 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ABCF3Q9NUQ8 709 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 FAM120CQ9NX05 1096 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 SAE1Q9UBE0 346 aaPredicted RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 COPS7AQ9UBW8 275 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 PRSS50Q9UI38 385 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 TSR3Q9UJK0 312 aaKnown RBP2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ZFP69BQ9UJL9 534 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 DAPP1Q9UN19 280 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 HEY1Q9Y5J3 304 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 MRFAP1Q9Y605 127 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 ATP23Q9Y6H3 246 aa2.87□□□□□ -1.95
TCOF1-208ENST00000506063 VPS13DQ5THJ4 4388 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 DNAH11Q96DT5 4516 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 A0A1W2PR80 420 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 OR2M5A3KFT3 312 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SYNDIG1LA6NDD5 238 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF839A8K0R7 811 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ADARB2-AS1A8MUL3 147 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 CXorf49A8MYA2 514 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF487B1APH4 448 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 B9A039 149 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 OR1F1O43749 312 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 XPNPEP2O43895 674 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 FGF17O60258 216 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 CDH16O75309 829 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 UGT2B11O75310 529 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ERLIN1O75477 346 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 EEDO75530 441 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PPM1BO75688 479 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PLATP00750 562 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 TUBBP07437 444 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 IGHV4-38-2P0DP08 117 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ENO3P13929 434 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 IGLL1P15814 213 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PECAM1P16284 738 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 NPPBP16860 134 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 GATA3P23771 443 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 COL8A2P25067 703 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 CNTFP26441 200 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MSX2P35548 267 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 AHRP35869 848 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SERPINF1P36955 418 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MAGEA1P43355 309 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 GPR6P46095 362 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 STT3AP46977 705 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RFX3P48380 749 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 NEK2P51955 445 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 EEFSECP57772 596 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 HERVK_113P63132 956 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ERVK-8P63133 956 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 DYNLT1P63172 113 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 BTN3A2P78410 334 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MYBPC1Q00872 1141 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 IL1RL1Q01638 556 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RASGEF1BQ0VAM2 473 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SLAMF1Q13291 335 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SERTAD2Q14140 314 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms