RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LRRC37BQ96QE4 947 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 PCDHAC1Q9H158 963 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 HHATLQ9HCP6 504 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CNIH4Q9P003 139 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 LIPT1Q9Y234 373 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRRC3CA6NJW4 275 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CCT8L1PA6NM43 557 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ALDH9A1P49189 494 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 KHKP50053 298 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF267Q14586 743 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 DHRS4L2Q6PKH6 230 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SNX32Q86XE0 403 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC5A8Q8N695 610 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 VPS37AQ8NEZ2 397 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 THOC1Q96FV9 657 aaKnown RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 UBL7Q96S82 380 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ANKRA2Q9H9E1 313 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 TPT1P8Q9HAU6 139 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZBTB20Q9HC78 741 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARMCX1Q9P291 453 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 COPS7AQ9UBW8 275 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 RNF103-CHMP3A0A140T963 221 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ALG1L2C9J202 215 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 RFXANKO14593 260 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 HNRNPCL1O60812 293 aaKnown RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ITGA10O75578 1167 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 KRT75O95678 551 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CHRM4P08173 479 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CD247P20963 164 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 NT5EP21589 574 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CALB2P22676 271 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 TDGF1P3P51864 188 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 COL28A1Q2UY09 1125 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGAP7PQ5VUJ5 663 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 DHDDSQ86SQ9 333 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CMIPQ8IY22 773 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC15A3Q8IY34 581 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 BEST3Q8N1M1 668 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARHGAP24Q8N264 748 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZFP62Q8NB50 900 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CLEC1AQ8NC01 280 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 PHF10Q8WUB8 498 aaKnown RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 DUS3LQ96G46 650 aaKnown RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SGCZQ96LD1 299 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGAP4Q96P64 663 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZDHHC11Q9H8X9 412 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CBLCQ9ULV8 474 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 C15orf38-AP3S2A0A0A6YYH1 394 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR5H15A6NDH6 313 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 NR5A2O00482 541 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 NME4O00746 187 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR10H2O60403 315 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR6B1O95007 311 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 C8BP07358 591 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SFTPCP11686 197 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ETS2P15036 469 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 PGM1P36871 562 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 CD96P40200 585 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 HSPB3Q12988 150 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 EFR3AQ14156 821 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 FGFBP1Q14512 234 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ST3GAL2Q16842 350 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 PGS1Q32NB8 556 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 GLYR1Q49A26 553 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 C6orf10Q5SRN2 563 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 RTL4Q6ZR62 310 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARPINQ7Z6K5 226 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 TRIML2Q8N7C3 387 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 BCAS4Q8TDM0 211 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 RNF31Q96EP0 1072 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 RTN4RQ9BZR6 473 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 GPR83Q9NYM4 423 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 SH3BP4Q9P0V3 963 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 NPFFR2Q9Y5X5 522 aa7.61□□□□□ -1.19
CDC42SE2-208ENST00000505065 MGAQ8IWI9 3026 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 ANKRD11Q6UB99 2663 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARGFXA6NJG6 315 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 DUXAA6NLW8 204 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 A8MVJ9 347 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 MATN1P21941 496 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 PSMA4P25789 261 aaKnown RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 HTR1EP28566 365 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 PPM1FP49593 454 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 CORO7P57737 925 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZSWIM7Q19AV6 140 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 DEFB109BQ30KR1 87 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 BTBD16Q32M84 506 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 TBCELQ5QJ74 424 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 NXNQ6DKJ4 435 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC29A4Q7RTT9 530 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZAR1Q86SH2 424 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 RPS19BP1Q86WX3 136 aaKnown RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 PNPLA2Q96AD5 504 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 COL21A1Q96P44 957 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SIGLEC12Q96PQ1 595 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR51I1Q9H343 314 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 QPCTLQ9NXS2 382 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 NCOA6Q14686 2063 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 GXYLT2A0PJZ3 443 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms